Detailed information NTG0319168

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: D9C09_RS10140
• Genome accession: NZ_CP032852
• Coordinates: 1953547..1954500 (+)
• Length: 317 a.a.
• NCBI ID: WP_069837427.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain GFR-12
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1948547..1959500

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C09_RS10110 (D9C09_10110)	argF	1949088..1950047 (+)	960	WP_014479432.1	ornithine carbamoyltransferase	-
D9C09_RS10120 (D9C09_10120)	yjzC	1951423..1951602 (+)	180	WP_003245356.1	YjzC family protein	-
D9C09_RS10125 (D9C09_10125)	yjzD	1951649..1951834 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
D9C09_RS10130 (D9C09_10130)	-	1952083..1952817 (+)	735	WP_014479433.1	hypothetical protein	-
D9C09_RS10135 (D9C09_10135)	-	1952899..1953456 (+)	558	WP_014479435.1	hypothetical protein	-
D9C09_RS10140 (D9C09_10140)	med	1953547..1954500 (+)	954	WP_069837427.1	transcriptional regulator Med	Regulator
D9C09_RS10145 (D9C09_10145)	comZ	1954515..1954706 (+)	192	WP_046380930.1	ComG operon transcriptional repressor ComZ	Regulator
D9C09_RS10150 (D9C09_10150)	yjzB	1954736..1954975 (-)	240	WP_003232972.1	spore coat protein YjzB	-
D9C09_RS10155 (D9C09_10155)	fabH	1955140..1956078 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
D9C09_RS10160 (D9C09_10160)	fabF	1956101..1957342 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
D9C09_RS10165 (D9C09_10165)	yjaZ	1957418..1958203 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
D9C09_RS10170 (D9C09_10170)	appD	1958394..1959380 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=319168 D9C09_RS10140 WP_069837427.1 1953547..1954500(+) (med) [Bacillus subtilis subsp. subtilis strain GFR-12]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=319168 D9C09_RS10140 WP_069837427.1 1953547..1954500(+) (med) [Bacillus subtilis subsp. subtilis strain GFR-12]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGTTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997