Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | D9C09_RS05410 | Genome accession | NZ_CP032852 |
| Coordinates | 1057253..1057702 (+) | Length | 149 a.a. |
| NCBI ID | WP_014475770.1 | Uniprot ID | A0A0D1KPR3 |
| Organism | Bacillus subtilis subsp. subtilis strain GFR-12 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 1052253..1062702
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9C09_RS05390 (D9C09_05390) | hxlR | 1053467..1053829 (-) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
| D9C09_RS05395 (D9C09_05395) | hxlA | 1054058..1054690 (+) | 633 | WP_003234604.1 | 3-hexulose-6-phosphate synthase | - |
| D9C09_RS05400 (D9C09_05400) | hxlB | 1054696..1055253 (+) | 558 | WP_014478803.1 | 6-phospho-3-hexuloisomerase | - |
| D9C09_RS05405 (D9C09_05405) | tlpC | 1055364..1057085 (+) | 1722 | Protein_1013 | methyl-accepting chemotaxis protein TlpC | - |
| D9C09_RS05410 (D9C09_05410) | nucA/comI | 1057253..1057702 (+) | 450 | WP_014475770.1 | DNA-entry nuclease | Machinery gene |
| D9C09_RS05415 (D9C09_05415) | nin/comJ | 1057729..1058127 (+) | 399 | WP_014478800.1 | DNA-entry nuclease inhibitor | Regulator |
| D9C09_RS05420 (D9C09_05420) | bglC | 1058164..1059597 (-) | 1434 | WP_014478799.1 | 6-phospho-beta-glucosidase | - |
| D9C09_RS05425 (D9C09_05425) | - | 1059670..1060399 (-) | 730 | Protein_1017 | AAA family ATPase | - |
| D9C09_RS05430 (D9C09_05430) | - | 1060418..1060738 (-) | 321 | WP_014478796.1 | DUF3147 family protein | - |
| D9C09_RS05435 (D9C09_05435) | - | 1060726..1061148 (-) | 423 | WP_014478795.1 | MarR family transcriptional regulator | - |
| D9C09_RS05440 (D9C09_05440) | yckD | 1061276..1061608 (-) | 333 | WP_014478794.1 | YckD family protein | - |
| D9C09_RS05445 (D9C09_05445) | yckC | 1061690..1062145 (-) | 456 | WP_014478793.1 | RDD family protein | - |
| D9C09_RS05450 (D9C09_05450) | - | 1062165..1062362 (-) | 198 | WP_121509395.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16440.39 Da Isoelectric Point: 4.5282
>NTDB_id=319155 D9C09_RS05410 WP_014475770.1 1057253..1057702(+) (nucA/comI) [Bacillus subtilis subsp. subtilis strain GFR-12]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=319155 D9C09_RS05410 WP_014475770.1 1057253..1057702(+) (nucA/comI) [Bacillus subtilis subsp. subtilis strain GFR-12]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
98.658 |
100 |
0.987 |