Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   D8Z77_RS16615 Genome accession   NZ_CP032848
Coordinates   3576446..3577402 (+) Length   318 a.a.
NCBI ID   WP_003338614.1    Uniprot ID   -
Organism   Brevibacillus laterosporus strain Bl-zj     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3571446..3582402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D8Z77_RS16600 (D8Z77_16600) - 3572420..3573307 (-) 888 WP_121474032.1 hypothetical protein -
  D8Z77_RS16605 (D8Z77_16605) - 3573526..3574710 (+) 1185 WP_003338610.1 pyridoxal phosphate-dependent aminotransferase -
  D8Z77_RS16610 (D8Z77_16610) asnS 3574823..3576115 (+) 1293 WP_003341640.1 asparagine--tRNA ligase -
  D8Z77_RS16615 (D8Z77_16615) ceuB 3576446..3577402 (+) 957 WP_003338614.1 ABC transporter permease Machinery gene
  D8Z77_RS16620 (D8Z77_16620) - 3577389..3578345 (+) 957 WP_022583839.1 iron chelate uptake ABC transporter family permease subunit -
  D8Z77_RS16625 (D8Z77_16625) - 3578339..3579097 (+) 759 WP_003338616.1 ABC transporter ATP-binding protein -
  D8Z77_RS16630 (D8Z77_16630) - 3579504..3580469 (+) 966 WP_003338617.1 siderophore ABC transporter substrate-binding protein -
  D8Z77_RS16635 (D8Z77_16635) - 3580645..3581379 (+) 735 WP_121474033.1 DnaD domain protein -
  D8Z77_RS16640 (D8Z77_16640) - 3581642..3582082 (+) 441 WP_003338619.1 hypothetical protein -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 35360.93 Da        Isoelectric Point: 9.9561

>NTDB_id=319128 D8Z77_RS16615 WP_003338614.1 3576446..3577402(+) (ceuB) [Brevibacillus laterosporus strain Bl-zj]
MKKRYLFLALIILSMCSLFIGVKNITPLDILNFNNEQVEIFLISRVPRLVSIIVAGISLSICGLIMQQITRNKFVSPTTA
GTMDCARLGVLVSLMLFTTESPIVKMIVAFIFALGGTFIFMKILRKIKFKDNIFIPLVGIMFGNIISSISTFFAYKYDLI
QNISSWLQGDFSMIMKGRYELLYISIPLVIIAFLYANKFTVAGMGEEFAVNLGLNYQRVINIGLIIVAMISSLVLLTVGM
IPFLGLIIPNIVSIYRGDNLRNSLPHTALLGAVFVLACDILGRIVIFPYELSIGLMVGVIGSGIFLYLLMRRNAYATM

Nucleotide


Download         Length: 957 bp        

>NTDB_id=319128 D8Z77_RS16615 WP_003338614.1 3576446..3577402(+) (ceuB) [Brevibacillus laterosporus strain Bl-zj]
ATGAAAAAGAGATATTTATTTTTAGCATTAATCATCCTATCCATGTGCTCCTTATTTATTGGAGTTAAAAACATTACTCC
ACTTGACATTCTAAATTTTAATAATGAGCAGGTTGAAATTTTCTTAATTAGCCGTGTTCCACGATTAGTTAGCATTATTG
TGGCTGGTATTAGCCTTAGTATCTGTGGCTTAATCATGCAGCAGATCACCCGTAATAAATTCGTATCTCCTACTACTGCT
GGAACGATGGACTGTGCTCGATTAGGAGTGCTGGTATCACTCATGCTATTTACTACGGAGAGTCCGATTGTAAAGATGAT
TGTCGCATTCATTTTTGCCTTAGGCGGCACCTTTATTTTTATGAAAATCCTTAGAAAAATAAAGTTCAAAGACAATATCT
TTATTCCATTGGTAGGTATTATGTTTGGTAATATTATCAGTTCTATAAGCACTTTCTTTGCTTATAAATATGACCTGATA
CAAAATATATCCTCATGGTTACAAGGAGACTTCTCCATGATCATGAAGGGAAGATATGAGCTTTTGTATATTAGTATCCC
GCTTGTCATTATCGCCTTTCTTTATGCGAATAAATTCACGGTCGCAGGAATGGGAGAAGAATTCGCGGTTAATCTAGGAC
TCAACTATCAGCGTGTGATCAATATCGGATTAATCATCGTTGCTATGATTTCCTCTCTGGTATTGCTCACAGTCGGAATG
ATTCCATTCCTTGGTTTAATTATTCCGAACATCGTTTCCATTTATCGTGGGGATAATCTACGGAACAGTCTACCGCATAC
AGCCTTACTCGGAGCCGTATTTGTCCTAGCATGTGATATATTAGGGCGTATCGTAATTTTTCCTTATGAGCTCTCGATTG
GACTTATGGTCGGAGTTATCGGCAGTGGAATCTTCCTGTACTTACTCATGAGGAGAAATGCATATGCAACAATGTAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

57.98

96.541

0.56

Multiple sequence alignment