Detailed information
Bioinformatically predicted
Overview
| Name | pilZ | Type | Machinery gene |
| Locus tag | FDK04_RS12140 | Genome accession | NZ_CP039990 |
| Coordinates | 2595244..2595600 (+) | Length | 118 a.a. |
| NCBI ID | WP_003091119.1 | Uniprot ID | A0A0H2ZD30 |
| Organism | Pseudomonas aeruginosa strain T2101 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2590244..2600600
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDK04_RS12115 (FDK04_12415) | fabF | 2590456..2591700 (+) | 1245 | WP_003104132.1 | beta-ketoacyl-ACP synthase II | - |
| FDK04_RS12120 (FDK04_12420) | pabC | 2591700..2592515 (+) | 816 | WP_015649131.1 | aminodeoxychorismate lyase | - |
| FDK04_RS12125 (FDK04_12425) | mltG | 2592521..2593570 (+) | 1050 | WP_003104128.1 | endolytic transglycosylase MltG | - |
| FDK04_RS12130 (FDK04_12430) | tmk | 2593599..2594231 (+) | 633 | WP_003091125.1 | dTMP kinase | - |
| FDK04_RS12135 (FDK04_12435) | - | 2594224..2595210 (+) | 987 | WP_003104126.1 | DNA polymerase III subunit delta' | - |
| FDK04_RS12140 (FDK04_12440) | pilZ | 2595244..2595600 (+) | 357 | WP_003091119.1 | PilZ domain-containing protein | Machinery gene |
| FDK04_RS12145 (FDK04_12445) | - | 2595615..2596391 (+) | 777 | WP_112302932.1 | TatD family hydrolase | - |
| FDK04_RS12150 (FDK04_12450) | - | 2596617..2597750 (-) | 1134 | WP_003118082.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| FDK04_RS12155 (FDK04_12455) | - | 2597836..2598474 (+) | 639 | WP_003091114.1 | TetR/AcrR family transcriptional regulator | - |
| FDK04_RS12160 (FDK04_12460) | - | 2598624..2599520 (+) | 897 | WP_003091113.1 | radical SAM protein | - |
| FDK04_RS12165 (FDK04_12465) | - | 2599585..2600217 (+) | 633 | WP_003091112.1 | DUF4823 domain-containing protein | - |
Sequence
Protein
Download Length: 118 a.a. Molecular weight: 12903.98 Da Isoelectric Point: 9.9969
>NTDB_id=318970 FDK04_RS12140 WP_003091119.1 2595244..2595600(+) (pilZ) [Pseudomonas aeruginosa strain T2101]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
Nucleotide
Download Length: 357 bp
>NTDB_id=318970 FDK04_RS12140 WP_003091119.1 2595244..2595600(+) (pilZ) [Pseudomonas aeruginosa strain T2101]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAAGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAAGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilZ | Legionella pneumophila str. Paris |
49.074 |
91.525 |
0.449 |
| pilZ | Legionella pneumophila strain ERS1305867 |
49.074 |
91.525 |
0.449 |