Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   FCJ76_RS15485 Genome accession   NZ_CP039935
Coordinates   2969692..2970387 (-) Length   231 a.a.
NCBI ID   WP_048655237.1    Uniprot ID   -
Organism   Bacillus subtilis strain H19     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2964692..2975387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FCJ76_RS15465 yttA 2965119..2965865 (+) 747 WP_134981912.1 LMBR1 domain-containing protein -
  FCJ76_RS15470 bceB 2965902..2967842 (-) 1941 WP_134981913.1 bacitracin ABC transporter permease BceB -
  FCJ76_RS15475 bceA 2967832..2968593 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  FCJ76_RS15480 bceS 2968695..2969699 (-) 1005 WP_015384427.1 two-component sensor histidine kinase BceS -
  FCJ76_RS15485 braR 2969692..2970387 (-) 696 WP_048655237.1 two-component response regulator BceR Regulator
  FCJ76_RS15490 ytrF 2970484..2971794 (-) 1311 WP_038427856.1 ABC transporter permease YtrF -
  FCJ76_RS15495 ytrE 2971784..2972479 (-) 696 WP_032726455.1 ABC transporter ATP-binding protein YtrE -
  FCJ76_RS15500 ytrD 2972494..2973471 (-) 978 WP_137200952.1 ABC transporter permease YtrD -
  FCJ76_RS15505 ytrC 2973501..2974487 (-) 987 WP_134983574.1 ABC transporter permease YtrC -
  FCJ76_RS15510 ytrB 2974481..2975359 (-) 879 WP_137200954.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26894.80 Da        Isoelectric Point: 5.3731

>NTDB_id=318801 FCJ76_RS15485 WP_048655237.1 2969692..2970387(-) (braR) [Bacillus subtilis strain H19]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=318801 FCJ76_RS15485 WP_048655237.1 2969692..2970387(-) (braR) [Bacillus subtilis strain H19]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGTGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGTCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment