Detailed information NTG0318735

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: FCJ76_RS06815
• Genome accession: NZ_CP039935
• Coordinates: 1299360..1300496 (+)
• Length: 378 a.a.
• NCBI ID: WP_015252291.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain H19
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1294360..1305496

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FCJ76_RS06795	uxaA	1294809..1296302 (+)	1494	WP_086343734.1	altronate dehydratase family protein	-
FCJ76_RS06800	yjnA	1296341..1297105 (-)	765	WP_014476525.1	sulfite exporter TauE/SafE family protein	-
FCJ76_RS06805	bstD	1297330..1297794 (-)	465	WP_014479541.1	DinB family protein	-
FCJ76_RS06810	yjoB	1297943..1299214 (+)	1272	WP_003245490.1	ATPase YjoB	-
FCJ76_RS06815	rapC	1299360..1300496 (+)	1137	WP_015252291.1	response regulator aspartate phosphatase RapA	Regulator
FCJ76_RS06820	phrA	1300486..1300620 (+)	135	WP_003245487.1	phosphatase RapA inhibitor PhrA	-
FCJ76_RS06825	yjpA	1300650..1300907 (-)	258	WP_024572656.1	YciI family protein	-
FCJ76_RS06830	xlyB	1301028..1301981 (+)	954	WP_134982734.1	N-acetylmuramoyl-L-alanine amidase	-
FCJ76_RS06835	yjqA	1302021..1302398 (-)	378	WP_014476529.1	PH domain-containing protein	-
FCJ76_RS06840	pghB	1302503..1303105 (+)	603	WP_137200727.1	poly-gamma-glutamate hydrolase family protein	-
FCJ76_RS06845	xpdC	1303181..1304017 (+)	837	WP_003245071.1	manganese catalase family protein	-
FCJ76_RS06850	xkdA	1304061..1304657 (-)	597	WP_024572596.1	ImmA/IrrE family metallo-endopeptidase	-
FCJ76_RS06855	xre	1304820..1305161 (-)	342	WP_134982740.1	HTH-type transcriptional regulator Xre	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 45046.23 Da
• Isoelectric Point: 4.7218

>NTDB_id=318735 FCJ76_RS06815 WP_015252291.1 1299360..1300496(+) (rapC) [Bacillus subtilis strain H19]
MRMKQTIPSSYVGLKINEWYTHIRQFHVAEAERVKLEVEREIEDMEEDQDLLLYYSLMEFRHRVMLDYIKPFGEDTSQLE
FSELLEDIEGNQYKLTGLLEYYFNFFRGMYEFKQKMFVSAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFYNLKQTYVS
MSYAVQALETYQMYETYTVRRIQCEFVIAGNYDDMQYPERALPHLELALDLAKKEGNPRLISSALYNLGNCYEKMGELQK
AAEYFEKSVSICKSEKFDNLPHSIYSLTQVLYKQKNDAEAQKKYREGLEIARQYSDELFVELFQFLHALYGKNIDTESVS
HTFQFLEEHMLYPYIEELAHDAAQFYIENGQPEKALSFYEKMVHAQKQIQRGDCLYEI

Nucleotide

• Length: 1137 bp

>NTDB_id=318735 FCJ76_RS06815 WP_015252291.1 1299360..1300496(+) (rapC) [Bacillus subtilis strain H19]
TTGAGGATGAAGCAGACGATTCCGTCCTCTTATGTCGGGCTTAAAATTAATGAATGGTATACTCATATCCGGCAGTTCCA
CGTCGCTGAAGCCGAACGGGTCAAGCTCGAAGTAGAAAGAGAAATTGAGGATATGGAAGAAGACCAAGATTTGCTGCTGT
ATTATTCTTTAATGGAGTTCAGGCATCGTGTCATGCTGGATTACATTAAGCCTTTTGGAGAGGACACGTCGCAGCTAGAG
TTTTCAGAATTATTAGAAGACATCGAAGGGAATCAGTACAAGCTGACAGGGCTTCTCGAATATTACTTTAATTTTTTTCG
AGGAATGTATGAATTTAAGCAGAAAATGTTTGTCAGTGCCATGATGTACTATAAACGGGCAGAAAAGAATCTTGCCCTCG
TCTCGGATGATATTGAGAAAGCCGAGTTTGCTTTTAAAATGGCCGAGATTTTTTACAATTTAAAACAAACCTATGTTTCG
ATGAGCTACGCCGTTCAGGCATTAGAAACATACCAAATGTATGAAACGTACACCGTCCGCAGAATCCAATGTGAATTCGT
TATTGCAGGTAATTATGATGATATGCAGTATCCAGAAAGAGCATTGCCCCACTTAGAACTGGCTTTAGATCTTGCAAAGA
AAGAAGGCAATCCCCGCCTGATCAGTTCCGCCCTATATAATCTCGGAAACTGCTATGAGAAAATGGGTGAACTGCAAAAG
GCAGCCGAATACTTTGAGAAATCTGTTTCTATTTGCAAGTCGGAAAAGTTCGATAATCTTCCGCATTCTATCTACTCTTT
AACACAAGTTCTGTATAAACAAAAAAATGACGCCGAAGCGCAAAAAAAGTATCGTGAAGGATTGGAAATCGCCCGTCAAT
ACAGTGATGAATTATTTGTGGAGCTTTTTCAATTTTTACATGCGTTATACGGAAAAAACATTGACACAGAATCGGTCTCA
CACACCTTTCAATTTCTTGAAGAACATATGCTGTATCCTTATATTGAAGAGCTGGCGCATGATGCTGCCCAATTCTATAT
AGAAAACGGACAGCCCGAAAAAGCACTTTCATTTTATGAGAAAATGGTGCACGCACAAAAACAAATCCAGAGAGGAGATT
GTTTATATGAAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-67)

• Tetratricopeptide repeat (TPR_12) (221-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.947	99.471	0.447
rapF	Bacillus subtilis subsp. subtilis str. 168	41.689	100	0.418