Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | D8S97_RS00985 | Genome accession | NZ_CP032759 |
| Coordinates | 195630..196139 (+) | Length | 169 a.a. |
| NCBI ID | WP_158361049.1 | Uniprot ID | A0A3G2I5G0 |
| Organism | Buchnera aphidicola (Rhopalosiphum maidis) strain BTI | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 190630..201139
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8S97_RS00965 (D8S97_00965) | - | 191272..191961 (-) | 690 | WP_158361045.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| D8S97_RS00970 (D8S97_00970) | ruvX | 191991..192404 (-) | 414 | WP_158361046.1 | Holliday junction resolvase RuvX | - |
| D8S97_RS00975 (D8S97_00975) | gshB | 192415..193377 (-) | 963 | WP_158361047.1 | glutathione synthase | - |
| D8S97_RS00980 (D8S97_00980) | dnaB | 193518..194915 (-) | 1398 | WP_158361048.1 | replicative DNA helicase | - |
| D8S97_RS00985 (D8S97_00985) | ssb | 195630..196139 (+) | 510 | WP_158361049.1 | single-stranded DNA-binding protein | Machinery gene |
| D8S97_RS00990 (D8S97_00990) | - | 196186..196515 (-) | 330 | WP_158361050.1 | alpha/beta fold hydrolase | - |
| D8S97_RS00995 (D8S97_00995) | - | 196571..196957 (-) | 387 | WP_158361051.1 | alpha/beta fold hydrolase | - |
| D8S97_RS01000 (D8S97_01000) | - | 197114..197713 (+) | 600 | WP_158361052.1 | NfuA family Fe-S biogenesis protein | - |
| D8S97_RS01005 (D8S97_01005) | ansA | 197782..198795 (-) | 1014 | WP_158361053.1 | asparaginase | - |
| D8S97_RS01010 (D8S97_01010) | - | 199018..200615 (+) | 1598 | Protein_189 | peptide chain release factor 3 | - |
Sequence
Protein
Download Length: 169 a.a. Molecular weight: 19255.59 Da Isoelectric Point: 6.7354
>NTDB_id=318565 D8S97_RS00985 WP_158361049.1 195630..196139(+) (ssb) [Buchnera aphidicola (Rhopalosiphum maidis) strain BTI]
MASRGVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTEWHRIVLFGKLAEIAGEYLRKGSQVYI
EGSLQTRKWQDQNGLERYTTEVIVNIGGTMQMLGNRNSNSHNVVLNDNNNILKTKKTETNNSPKNIEKYKLNKEQIDSSE
IDFDDEIPF
MASRGVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTEWHRIVLFGKLAEIAGEYLRKGSQVYI
EGSLQTRKWQDQNGLERYTTEVIVNIGGTMQMLGNRNSNSHNVVLNDNNNILKTKKTETNNSPKNIEKYKLNKEQIDSSE
IDFDDEIPF
Nucleotide
Download Length: 510 bp
>NTDB_id=318565 D8S97_RS00985 WP_158361049.1 195630..196139(+) (ssb) [Buchnera aphidicola (Rhopalosiphum maidis) strain BTI]
ATGGCAAGTAGAGGTGTAAATAAAGTAATATTAATTGGTCATTTAGGCCAAGATCCTGAAGTTCGTTATATGCCGAATGG
TAATGCAGTAGTAAATATGACACTTGCAACTTCAGAGAATTGGAAAGATAAAAATACTGGCGAAAATAAAGAGAAAACAG
AATGGCATAGAATAGTATTATTTGGAAAATTAGCTGAAATTGCTGGAGAATATTTGAGAAAAGGTTCTCAAGTATATATT
GAAGGATCTCTTCAAACTAGAAAATGGCAGGACCAAAATGGTCTAGAACGTTATACAACAGAAGTCATAGTGAACATTGG
CGGTACAATGCAAATGTTAGGAAATCGTAATTCAAATTCTCATAATGTTGTATTAAATGATAATAATAATATTTTAAAAA
CAAAAAAAACAGAAACAAATAATTCTCCAAAAAATATAGAAAAGTATAAATTAAATAAAGAACAAATAGATTCTTCAGAA
ATAGATTTTGATGATGAAATTCCTTTTTAG
ATGGCAAGTAGAGGTGTAAATAAAGTAATATTAATTGGTCATTTAGGCCAAGATCCTGAAGTTCGTTATATGCCGAATGG
TAATGCAGTAGTAAATATGACACTTGCAACTTCAGAGAATTGGAAAGATAAAAATACTGGCGAAAATAAAGAGAAAACAG
AATGGCATAGAATAGTATTATTTGGAAAATTAGCTGAAATTGCTGGAGAATATTTGAGAAAAGGTTCTCAAGTATATATT
GAAGGATCTCTTCAAACTAGAAAATGGCAGGACCAAAATGGTCTAGAACGTTATACAACAGAAGTCATAGTGAACATTGG
CGGTACAATGCAAATGTTAGGAAATCGTAATTCAAATTCTCATAATGTTGTATTAAATGATAATAATAATATTTTAAAAA
CAAAAAAAACAGAAACAAATAATTCTCCAAAAAATATAGAAAAGTATAAATTAAATAAAGAACAAATAGATTCTTCAGAA
ATAGATTTTGATGATGAAATTCCTTTTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
57.062 |
100 |
0.598 |
| ssb | Glaesserella parasuis strain SC1401 |
46.739 |
100 |
0.509 |
| ssb | Neisseria gonorrhoeae MS11 |
42.045 |
100 |
0.438 |
| ssb | Neisseria meningitidis MC58 |
42.045 |
100 |
0.438 |