Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   AFLV_RS11090 Genome accession   NC_011567
Coordinates   2115022..2115981 (-) Length   319 a.a.
NCBI ID   WP_049754082.1    Uniprot ID   -
Organism   Anoxybacillus flavithermus WK1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2110022..2120981
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AFLV_RS11065 (Aflv_2136) - 2110835..2111575 (-) 741 WP_012575675.1 YjbA family protein -
  AFLV_RS11070 (Aflv_2137) - 2111652..2111858 (-) 207 WP_012575676.1 hypothetical protein -
  AFLV_RS11075 (Aflv_2138) - 2111913..2112635 (-) 723 WP_012575677.1 DUF2268 domain-containing protein -
  AFLV_RS11080 (Aflv_2139) fabF 2112707..2113948 (-) 1242 WP_041639356.1 beta-ketoacyl-ACP synthase II -
  AFLV_RS11085 (Aflv_2140) - 2113982..2114914 (-) 933 WP_041638760.1 beta-ketoacyl-ACP synthase III -
  AFLV_RS11090 (Aflv_2141) med 2115022..2115981 (-) 960 WP_049754082.1 BMP family ABC transporter substrate-binding protein Regulator
  AFLV_RS11095 (Aflv_2142) - 2116066..2116767 (-) 702 WP_012575681.1 alpha/beta hydrolase -
  AFLV_RS11100 (Aflv_2143) - 2116907..2117086 (+) 180 WP_006318851.1 YjzD family protein -
  AFLV_RS11105 (Aflv_2144) clpB 2117313..2119895 (-) 2583 WP_012575682.1 ATP-dependent chaperone ClpB -
  AFLV_RS11110 (Aflv_2145) - 2119980..2120159 (-) 180 WP_003395421.1 YjzC family protein -

Sequence

Protein


Download         Length: 319 a.a.        Molecular weight: 35559.60 Da        Isoelectric Point: 6.4152

>NTDB_id=31850 AFLV_RS11090 WP_049754082.1 2115022..2115981(-) (med) [Anoxybacillus flavithermus WK1]
MLMWRYTYLIFALLVILSSCAPAQLSSGHVQKIGLLVSDTIDDQVWGTKGYKGLLRIQAKFRADVFYREGVNSKAAAAQA
VKELHRKGVNLIFGHGSEYGQYFHDLADKYPNIHFVFFNGEAKKKNVTSFNFKGHAMGFFGGMVAGHMTKTNKIGVIAAF
EWQPEVDGFFEGALYENENAHVDVEYVQSWDDINTALAIAERMIADGVDVIYPAGDKFSVPIIEKMKEYGLYAIGYVTDQ
ADLGERTVLTSTVQHVDELYELVAKKFIDGELKGGTTYVDFQDGVIELGTFSPLVNASFQQKIKKAITRYKATGKLPNE

Nucleotide


Download         Length: 960 bp        

>NTDB_id=31850 AFLV_RS11090 WP_049754082.1 2115022..2115981(-) (med) [Anoxybacillus flavithermus WK1]
ATGTTGATGTGGCGATATACATATTTAATTTTTGCACTACTTGTTATATTATCTTCTTGCGCTCCTGCTCAATTATCATC
GGGACATGTACAAAAGATCGGTTTGCTCGTTTCGGATACGATCGACGATCAAGTGTGGGGAACGAAAGGATATAAAGGGT
TGCTTCGTATTCAAGCGAAGTTTCGAGCAGACGTGTTTTATCGCGAAGGGGTCAACTCGAAAGCCGCTGCGGCACAAGCG
GTAAAAGAGCTTCACCGAAAAGGAGTCAATTTAATTTTCGGGCACGGAAGCGAGTATGGACAATATTTTCATGATCTTGC
GGACAAATATCCGAACATTCATTTTGTATTTTTTAACGGAGAGGCGAAAAAGAAAAACGTCACAAGTTTCAATTTCAAAG
GACATGCGATGGGCTTTTTTGGCGGGATGGTCGCAGGACATATGACGAAAACGAATAAAATTGGCGTGATCGCCGCATTT
GAATGGCAACCGGAAGTAGATGGCTTTTTCGAAGGAGCGTTATATGAAAACGAAAATGCCCATGTCGACGTTGAATATGT
GCAAAGTTGGGATGACATAAATACAGCTCTGGCGATTGCTGAGCGGATGATCGCAGATGGCGTAGATGTCATATATCCCG
CTGGCGATAAATTTAGCGTGCCGATTATTGAAAAAATGAAAGAATATGGGCTTTATGCGATCGGGTATGTAACAGACCAA
GCAGATTTAGGGGAACGAACAGTGCTGACAAGCACCGTCCAACATGTCGACGAACTGTACGAACTCGTTGCGAAAAAATT
TATAGATGGAGAGTTAAAAGGAGGAACGACATACGTCGACTTTCAAGACGGTGTCATCGAACTCGGAACGTTTAGCCCAC
TTGTCAATGCATCGTTTCAGCAAAAAATAAAAAAAGCGATTACGCGATATAAAGCAACGGGAAAATTGCCGAATGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(31-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

54.369

96.865

0.527

Multiple sequence alignment