Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   D8S77_RS07080 Genome accession   NZ_CP032700
Coordinates   1395133..1395942 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY556     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1390133..1400942
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D8S77_RS07070 (D8S77_07075) smc 1390458..1393997 (-) 3540 WP_129322117.1 chromosome segregation protein SMC -
  D8S77_RS07075 (D8S77_07080) rnc 1393998..1394690 (-) 693 WP_002990670.1 ribonuclease III -
  D8S77_RS07080 (D8S77_07085) vicX 1395133..1395942 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  D8S77_RS07085 (D8S77_07090) vicK 1395946..1397298 (-) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  D8S77_RS07090 (D8S77_07095) vicR 1397291..1398001 (-) 711 WP_129322120.1 response regulator YycF Regulator
  D8S77_RS07095 (D8S77_07100) - 1398163..1399197 (-) 1035 WP_194118140.1 DUF3114 domain-containing protein -
  D8S77_RS07100 (D8S77_07105) - 1399253..1400500 (-) 1248 WP_014407393.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=318331 D8S77_RS07080 WP_002985641.1 1395133..1395942(-) (vicX) [Streptococcus pyogenes strain TSPY556]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=318331 D8S77_RS07080 WP_002985641.1 1395133..1395942(-) (vicX) [Streptococcus pyogenes strain TSPY556]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment