Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   D8S76_RS07595 Genome accession   NZ_CP032699
Coordinates   1476670..1477395 (-) Length   241 a.a.
NCBI ID   WP_023078675.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY155     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1471670..1482395
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D8S76_RS07560 (D8S76_07555) rnpM 1471704..1472000 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  D8S76_RS07565 (D8S76_07560) nusA 1472016..1473173 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  D8S76_RS07570 (D8S76_07565) rimP 1473348..1473884 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  D8S76_RS07580 (D8S76_07575) trmB 1474143..1474778 (-) 636 WP_023078685.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  D8S76_RS07585 (D8S76_07580) ccrZ 1474778..1475569 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  D8S76_RS07590 (D8S76_07585) - 1475633..1476667 (-) 1035 WP_023078705.1 ABC transporter permease -
  D8S76_RS07595 (D8S76_07590) pptA 1476670..1477395 (-) 726 WP_023078675.1 ABC transporter ATP-binding protein Regulator
  D8S76_RS07600 (D8S76_07595) - 1477467..1477886 (+) 420 WP_002983376.1 HIT family protein -
  D8S76_RS07605 (D8S76_07600) - 1477883..1478239 (+) 357 WP_009880754.1 hypothetical protein -
  D8S76_RS07610 (D8S76_07605) - 1478350..1479624 (-) 1275 WP_020837594.1 biofilm formation/cell division transcriptional regulator BrpA -
  D8S76_RS07615 (D8S76_07610) - 1479633..1480157 (-) 525 WP_023078656.1 GNAT family N-acetyltransferase -
  D8S76_RS07620 (D8S76_07615) tsaE 1480132..1480593 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  D8S76_RS07625 (D8S76_07620) - 1480747..1482207 (-) 1461 WP_023079950.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26706.80 Da        Isoelectric Point: 4.5624

>NTDB_id=318282 D8S76_RS07595 WP_023078675.1 1476670..1477395(-) (pptA) [Streptococcus pyogenes strain TSPY155]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEVFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=318282 D8S76_RS07595 WP_023078675.1 1476670..1477395(-) (pptA) [Streptococcus pyogenes strain TSPY155]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGCTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGTTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment