Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DV532_RS22995 Genome accession   NZ_CP032677
Coordinates   4952326..4952727 (-) Length   133 a.a.
NCBI ID   WP_003257770.1    Uniprot ID   A0AAI8FHY9
Organism   Pseudomonas sp. Leaf58     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4947326..4957727
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV532_RS22980 (DV532_22980) - 4949290..4951329 (-) 2040 WP_236707476.1 methyl-accepting chemotaxis protein -
  DV532_RS22985 (DV532_22985) - 4951362..4951916 (-) 555 WP_056794529.1 chemotaxis protein CheW -
  DV532_RS22990 (DV532_22990) pilH 4951913..4952278 (-) 366 WP_012274551.1 twitching motility response regulator PilH -
  DV532_RS22995 (DV532_22995) pilG 4952326..4952727 (-) 402 WP_003257770.1 PleD family two-component system response regulator Regulator
  DV532_RS23000 (DV532_23000) gshB 4952969..4953922 (+) 954 WP_056794527.1 glutathione synthase -
  DV532_RS23005 (DV532_23005) - 4954013..4954918 (+) 906 WP_056794525.1 energy transducer TonB -
  DV532_RS23010 (DV532_23010) - 4954998..4955567 (+) 570 WP_056794523.1 YqgE/AlgH family protein -
  DV532_RS23015 (DV532_23015) ruvX 4955567..4955992 (+) 426 WP_003249316.1 Holliday junction resolvase RuvX -
  DV532_RS23020 (DV532_23020) pyrR 4956042..4956560 (+) 519 WP_056794521.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  DV532_RS23025 (DV532_23025) - 4956574..4957578 (+) 1005 WP_008099987.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14576.82 Da        Isoelectric Point: 6.4772

>NTDB_id=318120 DV532_RS22995 WP_003257770.1 4952326..4952727(-) (pilG) [Pseudomonas sp. Leaf58]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPSIIFVDVLMPRLDGYQTCAVIKHNSAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAAQQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=318120 DV532_RS22995 WP_003257770.1 4952326..4952727(-) (pilG) [Pseudomonas sp. Leaf58]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCACGCACGATCCGCCGCACCGCGCAGATGTTGCTTGGTGAAGC
CGGCTGCGAGGTGATCACTGCCAGCGATGGCTTCGATGCCCTGGCCAAGATCGTCGACCACCAGCCCAGTATCATCTTCG
TCGATGTGCTGATGCCGCGTCTGGACGGCTACCAGACTTGCGCGGTGATCAAGCACAACAGTGCCTTCAAGGACACCCCG
GTCATTCTGCTTTCGTCGCGTGACGGCCTGTTCGACAAGGCTCGCGGCCGGGTGGTCGGGTCCGATCAGTTCTTGACCAA
ACCGTTCAGCAAGGAAGAACTGCTCGACGCGATCCGTGCCCACGTGCCCGGTTTTGCCGCAGCCCAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632

Multiple sequence alignment