Detailed information    

insolico Bioinformatically predicted

Overview

Name   rexA   Type   Machinery gene
Locus tag   E8M05_RS11210 Genome accession   NZ_CP039457
Coordinates   736390..736527 (+) Length   45 a.a.
NCBI ID   WP_003064141.1    Uniprot ID   E0PCT8
Organism   Streptococcus pasteurianus strain WUSP067     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 731390..741527
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E8M05_RS03955 (E8M05_03950) - 732651..734837 (+) 2187 WP_003064133.1 alpha-galactosidase -
  E8M05_RS03960 (E8M05_03955) - 734856..736277 (+) 1422 WP_003064137.1 sucrose-specific PTS transporter subunit IIBC -
  E8M05_RS11210 rexA 736390..736527 (+) 138 WP_003064141.1 hypothetical protein Machinery gene
  E8M05_RS03965 (E8M05_03960) - 736632..737777 (-) 1146 WP_003064144.1 cobalamin-independent methionine synthase II family protein -
  E8M05_RS03970 (E8M05_03965) - 737986..738720 (+) 735 WP_003064147.1 PHP domain-containing protein -
  E8M05_RS03975 (E8M05_03970) - 738734..739357 (+) 624 WP_041974315.1 alpha/beta fold hydrolase -
  E8M05_RS03980 (E8M05_03975) - 739435..739611 (-) 177 WP_003064151.1 DUF3042 family protein -
  E8M05_RS03985 (E8M05_03980) miaA 739800..740687 (+) 888 WP_003064153.1 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA -

Sequence

Protein


Download         Length: 45 a.a.        Molecular weight: 5219.04 Da        Isoelectric Point: 4.5379

>NTDB_id=317879 E8M05_RS11210 WP_003064141.1 736390..736527(+) (rexA) [Streptococcus pasteurianus strain WUSP067]
MIYWEEFDNKSIALVAEALSKSYDRKNVDKYLVLLGGEQLEVVKL

Nucleotide


Download         Length: 138 bp        

>NTDB_id=317879 E8M05_RS11210 WP_003064141.1 736390..736527(+) (rexA) [Streptococcus pasteurianus strain WUSP067]
TTGATCTACTGGGAGGAATTTGACAACAAAAGCATTGCTCTAGTTGCAGAAGCTCTCAGCAAGTCTTATGATAGAAAAAA
CGTTGATAAATACCTCGTTTTGCTTGGTGGCGAACAGCTAGAAGTTGTTAAACTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E0PCT8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rexA Streptococcus pneumoniae R6

50

75.556

0.378