Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   E8M05_RS06605 Genome accession   NZ_CP039457
Coordinates   1247657..1249471 (-) Length   604 a.a.
NCBI ID   WP_003065252.1    Uniprot ID   E0PEB7
Organism   Streptococcus pasteurianus strain WUSP067     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1242657..1254471
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E8M05_RS06580 (E8M05_06570) - 1242675..1243595 (-) 921 WP_013851962.1 glycine betaine ABC transporter substrate-binding protein -
  E8M05_RS06585 (E8M05_06575) - 1243585..1244220 (-) 636 WP_013851963.1 ABC transporter permease -
  E8M05_RS06590 (E8M05_06580) - 1244210..1244662 (-) 453 WP_003065246.1 MarR family winged helix-turn-helix transcriptional regulator -
  E8M05_RS06595 (E8M05_06585) - 1244652..1245629 (-) 978 WP_117479603.1 alcohol dehydrogenase catalytic domain-containing protein -
  E8M05_RS06600 (E8M05_06590) rcrQ 1245895..1247667 (-) 1773 WP_058692202.1 ABC transporter ATP-binding protein Regulator
  E8M05_RS06605 (E8M05_06595) rcrP 1247657..1249471 (-) 1815 WP_003065252.1 ABC transporter ATP-binding protein Regulator
  E8M05_RS06610 (E8M05_06600) rcrR 1249475..1249915 (-) 441 WP_061100410.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  E8M05_RS06615 (E8M05_06605) - 1250088..1250498 (-) 411 WP_136596451.1 peptide deformylase -
  E8M05_RS06620 (E8M05_06610) - 1250495..1251004 (-) 510 WP_117479609.1 GNAT family N-acetyltransferase -
  E8M05_RS06625 (E8M05_06615) gdhA 1251281..1252630 (-) 1350 WP_003065263.1 NADP-specific glutamate dehydrogenase -
  E8M05_RS06630 (E8M05_06620) - 1252876..1253373 (+) 498 WP_003065265.1 DUF308 domain-containing protein -
  E8M05_RS11295 queF 1253429..1253920 (-) 492 WP_003065267.1 preQ(1) synthase -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67127.13 Da        Isoelectric Point: 5.9917

>NTDB_id=317840 E8M05_RS06605 WP_003065252.1 1247657..1249471(-) (rcrP) [Streptococcus pasteurianus strain WUSP067]
MLKILKRLTVKEVTMLIFAVLFVCLNVYLELKIPDYMSDITTLLSTEGTKVKDIFAWNFDAPGMRMVLLSLGSFAASVVV
GFLAARIAASFSTRLRDDIFHSVLNFSDAEIKKFSIPSLLTRTTNDITQIQLVFTMGIQVITKGPIMAIWAITKIADKNH
EWLLVLIVAVAVMFLMIMFLLMMVMPKQRMIQTLTDKLNSITRESLTGIRVVRAYNAEDYQDAKFAQANDNVTNLNLFIG
RSMALLSPVMTGISSGMTLAIYWIGAHLIENIAIPTDPTKIAGAMQDKVDLFSDMVVYSSYAMQVVMGFMMMIVVFFILP
RAVVAAGRINEVLETKSSIEYPETNQAKPTEKGSVEFDNVSFRYSKNSEAVLEHVSFKAKAGDTIAFIGSTGSGKSTLVN
LIPRFYDATEGTIKVDGIDVRQYDHDTLHKIVGYIPQKAVLFSGDIASNMDMGESNSSPLDDDKMWEALDLAQGKTFVEM
KDGKLKAPVAQSGQNFSGGQKQRLAIARALARKPEIIIFDDSFSALDYKTDRILRSQLKERTADMTKLIVAQRISTIMDA
DQILVLDEGKVVGQGTHEELLANNDVYREIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=317840 E8M05_RS06605 WP_003065252.1 1247657..1249471(-) (rcrP) [Streptococcus pasteurianus strain WUSP067]
ATGTTAAAAATTTTGAAACGCTTAACAGTAAAAGAAGTTACGATGCTTATTTTTGCTGTATTATTTGTGTGTTTGAATGT
TTATCTTGAGTTGAAAATTCCAGATTATATGTCGGATATCACAACCTTGCTATCAACAGAGGGAACAAAAGTAAAAGATA
TTTTTGCTTGGAACTTTGATGCGCCAGGGATGCGTATGGTCTTGCTTTCTTTGGGAAGCTTTGCGGCATCCGTCGTTGTC
GGTTTCCTGGCTGCTCGTATTGCGGCAAGTTTTAGTACACGTCTACGTGATGACATTTTCCATAGTGTCTTGAATTTTTC
AGATGCTGAAATCAAGAAATTTTCAATTCCTAGTCTTTTGACACGTACAACCAATGATATTACACAAATTCAATTGGTTT
TCACAATGGGAATCCAAGTCATTACTAAAGGACCTATCATGGCAATTTGGGCAATAACCAAGATTGCTGATAAAAATCAT
GAATGGCTATTGGTTCTTATTGTCGCAGTTGCGGTTATGTTCTTGATGATTATGTTCTTGTTGATGATGGTGATGCCTAA
ACAACGCATGATTCAAACATTAACCGATAAATTGAACAGTATTACGCGAGAATCATTGACAGGTATCCGTGTGGTGCGTG
CATACAATGCCGAAGATTATCAAGATGCCAAATTTGCACAAGCCAATGATAATGTTACCAATCTTAACCTCTTTATTGGA
CGTTCAATGGCGTTGTTATCTCCAGTAATGACAGGAATTTCAAGCGGAATGACACTTGCTATCTACTGGATTGGTGCGCA
TTTGATTGAAAATATTGCCATTCCGACAGATCCAACGAAAATTGCTGGCGCTATGCAAGATAAAGTTGATTTGTTCTCAG
ATATGGTTGTTTATTCATCATATGCCATGCAAGTTGTTATGGGATTCATGATGATGATTGTTGTATTCTTCATTTTACCT
CGTGCTGTTGTTGCTGCTGGGCGTATTAATGAAGTTCTTGAAACAAAATCTTCAATTGAATATCCAGAAACAAATCAAGC
TAAACCAACTGAAAAAGGTTCTGTTGAATTTGACAATGTTTCATTCCGTTACAGCAAAAATTCAGAAGCTGTTTTGGAAC
ACGTTTCCTTTAAAGCGAAAGCTGGAGACACGATTGCCTTTATCGGTTCAACTGGTTCTGGTAAATCAACTTTGGTGAAC
TTGATTCCACGTTTTTATGACGCGACAGAAGGAACGATTAAAGTCGATGGCATTGATGTTCGTCAATATGACCATGATAC
GCTTCATAAGATTGTTGGTTATATTCCGCAAAAAGCAGTGCTTTTCAGTGGGGATATCGCTTCAAATATGGATATGGGAG
AAAGCAATAGTTCGCCACTTGATGATGACAAGATGTGGGAAGCTCTTGATTTAGCTCAAGGTAAGACATTCGTTGAAATG
AAAGACGGTAAGTTAAAAGCACCTGTTGCTCAAAGTGGTCAAAACTTCTCAGGTGGTCAAAAACAACGTTTGGCAATTGC
GCGTGCTCTTGCTCGTAAACCTGAGATTATCATCTTTGATGATTCGTTCTCAGCACTTGACTACAAGACTGACCGAATCC
TTCGTTCACAGTTGAAAGAACGTACAGCTGATATGACGAAATTAATCGTGGCACAACGTATCTCAACGATTATGGACGCT
GACCAAATTTTGGTCTTGGATGAAGGTAAAGTTGTTGGTCAAGGTACGCACGAAGAATTGCTTGCAAACAACGATGTTTA
TCGTGAAATTGCTTACTCACAACTATCTAAGGAGGAATTAGAAAATGGAAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(372-522)

ABC transporter transmembrane region (ABC_membrane)

(17-271)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E0PEB7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

66.446

100

0.666

Multiple sequence alignment