Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   E8M05_RS05420 Genome accession   NZ_CP039457
Coordinates   1017535..1018197 (-) Length   220 a.a.
NCBI ID   WP_172456417.1    Uniprot ID   -
Organism   Streptococcus pasteurianus strain WUSP067     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1012535..1023197
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E8M05_RS05400 (E8M05_05395) ffh 1012874..1014439 (+) 1566 WP_003064717.1 signal recognition particle protein -
  E8M05_RS05405 (E8M05_05400) xerS 1014650..1015720 (+) 1071 WP_003064732.1 tyrosine recombinase XerS Machinery gene
  E8M05_RS05410 (E8M05_05405) - 1015827..1016507 (-) 681 WP_013851817.1 XRE family transcriptional regulator -
  E8M05_RS05415 (E8M05_05410) - 1016591..1017538 (-) 948 WP_048791145.1 HAMP domain-containing sensor histidine kinase -
  E8M05_RS05420 (E8M05_05415) braR 1017535..1018197 (-) 663 WP_172456417.1 response regulator transcription factor Regulator
  E8M05_RS05425 (E8M05_05420) - 1018285..1020264 (-) 1980 WP_013851819.1 FtsX-like permease family protein -
  E8M05_RS05430 (E8M05_05425) - 1020266..1021018 (-) 753 WP_003064738.1 ABC transporter ATP-binding protein -
  E8M05_RS11485 - 1021700..1021909 (-) 210 WP_052310719.1 hypothetical protein -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 25457.13 Da        Isoelectric Point: 4.9715

>NTDB_id=317828 E8M05_RS05420 WP_172456417.1 1017535..1018197(-) (braR) [Streptococcus pasteurianus strain WUSP067]
MKQGKIYIVEDDETIVKLLKQHLSQTYDVFSVTNFRAIKQEVEEIKPDLILIDITLPYFNGFYWTTEIRKSMTLPIIFIS
SSDDEMDTVMALNMGGDDFVSKPFSLTILDAKISAFLRRAYQFTSDNYQLEHFSLSRDGILSNGDDHITLSPTENKILAI
LFEHQNQVVPKEELLEKLWENESFIDQNTLSVNITRLRKKTQPLGFDRIHTVRGVGYLLK

Nucleotide


Download         Length: 663 bp        

>NTDB_id=317828 E8M05_RS05420 WP_172456417.1 1017535..1018197(-) (braR) [Streptococcus pasteurianus strain WUSP067]
ATGAAACAAGGAAAGATTTATATTGTCGAGGACGATGAAACTATCGTTAAACTTTTAAAACAACATCTTAGTCAAACTTA
TGATGTCTTTAGTGTCACTAATTTTCGAGCTATCAAGCAGGAAGTCGAAGAAATCAAACCTGACCTTATCTTGATTGATA
TCACGTTGCCATATTTTAATGGTTTTTATTGGACAACAGAAATTCGTAAAAGCATGACATTGCCGATTATTTTTATCTCA
TCTAGTGATGATGAAATGGATACTGTCATGGCACTTAATATGGGAGGAGATGATTTTGTGTCAAAGCCATTTTCTCTAAC
GATTTTAGATGCCAAAATTTCAGCTTTTTTAAGGCGTGCTTACCAGTTTACCTCGGATAATTACCAATTAGAACATTTTT
CTCTATCACGTGACGGGATTTTGTCAAACGGTGACGACCATATCACCCTATCTCCAACAGAAAATAAGATTTTAGCAATT
CTCTTTGAACATCAAAATCAAGTCGTTCCCAAAGAGGAATTACTCGAGAAGCTTTGGGAAAATGAAAGTTTCATTGACCA
AAACACCCTTAGTGTTAACATAACACGACTCCGCAAGAAAACACAACCATTAGGTTTCGATCGTATTCACACCGTGAGAG
GAGTTGGCTACCTTCTAAAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(146-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.872

99.091

0.455

Multiple sequence alignment