Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   E8M03_RS00125 Genome accession   NZ_CP039448
Coordinates   30729..31529 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain VGC1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 25729..36529
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E8M03_RS00110 (E8M03_00120) walK 26399..28225 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  E8M03_RS00115 (E8M03_00125) yycH 28218..29552 (+) 1335 WP_001060149.1 two-component system activity regulator YycH -
  E8M03_RS00120 (E8M03_00130) - 29553..30341 (+) 789 WP_001104161.1 two-component system regulatory protein YycI -
  E8M03_RS00125 (E8M03_00135) vicX 30729..31529 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  E8M03_RS00130 (E8M03_00140) adsA 31756..34062 (+) 2307 WP_149569673.1 LPXTG-anchored adenosine synthase AdsA -
  E8M03_RS00135 (E8M03_00145) rlmH 34430..34909 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  E8M03_RS00140 (E8M03_00150) - 35155..35460 (+) 306 WP_000677988.1 hypothetical protein -
  E8M03_RS00145 (E8M03_00155) - 35659..36522 (+) 864 WP_000680580.1 LEM-3-like GIY-YIG domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=317679 E8M03_RS00125 WP_000088649.1 30729..31529(+) (vicX) [Staphylococcus aureus strain VGC1]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=317679 E8M03_RS00125 WP_000088649.1 30729..31529(+) (vicX) [Staphylococcus aureus strain VGC1]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAATGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTGACAGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474