Detailed information NTG0317575

Bioinformatically predicted

Overview

• Name: comC
• Type: Machinery gene
• Locus tag: CFK76_RS00015
• Genome accession: NZ_CP032652
• Coordinates: 1919..2608 (-)
• Length: 229 a.a.
• NCBI ID: WP_076645336.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain LZ217
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1..7608

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CFK76_RS00010 (CFK76_00010)	-	1343..1915 (+)	573	WP_061827365.1	isochorismatase family protein	-
CFK76_RS00015 (CFK76_00015)	comC	1919..2608 (-)	690	WP_076645336.1	prepilin peptidase	Machinery gene
CFK76_RS00020 (CFK76_00020)	rpsL	2889..3302 (+)	414	WP_004270179.1	30S ribosomal protein S12	-
CFK76_RS00025 (CFK76_00025)	rpsG	3392..3862 (+)	471	WP_004270185.1	30S ribosomal protein S7	-
CFK76_RS00030 (CFK76_00030)	fusA	3958..6045 (+)	2088	WP_016265721.1	elongation factor G	-
CFK76_RS00035 (CFK76_00035)	-	6615..7166 (-)	552	WP_061827366.1	cysteine hydrolase family protein	-

Sequence

Protein

• Length: 229 a.a.
• Molecular weight: 26190.50 Da
• Isoelectric Point: 7.2085

>NTDB_id=317575 CFK76_RS00015 WP_076645336.1 1919..2608(-) (comC) [Latilactobacillus sakei strain LZ217]
MLLYLIIFYSGACCASFLTVCAWRLPIEKSIITPRSHCDCCQQPLAWHDLLPLFSYLYLHGHCRTCHAQIKPTFLFSELI
GGLLACFIFSESLSWDLAYLLVILFYISLVDLFYYILYPIPLFASLVPLFYLYWPQNHWLGATIFCCGLLLTTYWASGFG
FGDVELLTILTLWVGLEPVLRILLAACLICILFQGIKKIWPSPKQATRQIPFIPYISMGVVILLLQTPQ

Nucleotide

• Length: 690 bp

>NTDB_id=317575 CFK76_RS00015 WP_076645336.1 1919..2608(-) (comC) [Latilactobacillus sakei strain LZ217]
ATGTTACTTTATTTAATCATCTTTTATAGCGGTGCTTGTTGCGCCTCATTTCTAACCGTTTGCGCCTGGCGCTTACCCAT
CGAAAAGTCCATTATCACACCACGTTCGCACTGCGATTGCTGTCAGCAACCACTGGCTTGGCATGATTTATTACCACTAT
TCAGCTACCTATACTTACATGGCCACTGCCGCACTTGTCATGCTCAGATTAAGCCCACTTTTTTATTCAGCGAACTAATT
GGTGGTCTATTGGCCTGCTTCATTTTTAGCGAATCCCTTTCTTGGGACCTCGCTTATTTACTCGTGATTCTTTTTTACAT
CAGTCTCGTTGACCTCTTCTACTATATTCTCTATCCAATCCCCTTATTCGCATCACTGGTGCCCCTCTTTTATTTGTATT
GGCCACAGAATCATTGGCTAGGAGCCACCATCTTTTGCTGCGGGCTGTTGCTCACCACTTACTGGGCGTCTGGTTTTGGC
TTTGGCGATGTCGAGTTACTCACTATCCTAACGTTGTGGGTGGGCCTTGAACCCGTTTTGCGAATTCTCTTGGCGGCCTG
TCTAATTTGCATTCTATTTCAAGGCATCAAAAAAATCTGGCCATCGCCTAAACAAGCGACGCGCCAGATTCCGTTTATCC
CCTATATATCGATGGGTGTGGTAATTCTACTTCTACAAACACCGCAGTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (11-89)

• Type IV leader peptidase family (Peptidase_A24) (99-193)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comC	Latilactobacillus sakei subsp. sakei 23K	97.38	100	0.974