Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | EA665_RS11215 | Genome accession | NZ_CP039343 |
| Coordinates | 2340787..2341893 (-) | Length | 368 a.a. |
| NCBI ID | WP_001187341.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain TG31302 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2335787..2346893
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EA665_RS11185 (EA665_011185) | - | 2335903..2337489 (+) | 1587 | WP_000622642.1 | cytochrome ubiquinol oxidase subunit I | - |
| EA665_RS11190 (EA665_011190) | cydB | 2337486..2338631 (+) | 1146 | WP_000575163.1 | cytochrome d ubiquinol oxidase subunit II | - |
| EA665_RS11195 (EA665_011195) | cydX | 2338645..2338746 (+) | 102 | WP_000270276.1 | cytochrome bd-I oxidase subunit CydX | - |
| EA665_RS11200 (EA665_011200) | - | 2338747..2339046 (+) | 300 | WP_085916945.1 | cyd operon YbgE family protein | - |
| EA665_RS11205 (EA665_011205) | - | 2339104..2339775 (-) | 672 | WP_000175347.1 | DUF2057 domain-containing protein | - |
| EA665_RS11210 (EA665_011210) | - | 2340001..2340597 (-) | 597 | WP_000102943.1 | nitroreductase family protein | - |
| EA665_RS11215 (EA665_011215) | pilA | 2340787..2341893 (-) | 1107 | WP_001187341.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| EA665_RS11220 (EA665_011220) | - | 2342001..2342327 (-) | 327 | WP_000955082.1 | hypothetical protein | - |
| EA665_RS11225 (EA665_011225) | - | 2342428..2342787 (-) | 360 | WP_000185571.1 | hypothetical protein | - |
| EA665_RS11230 (EA665_011230) | - | 2343003..2343236 (+) | 234 | WP_000616034.1 | hypothetical protein | - |
| EA665_RS11235 (EA665_011235) | - | 2343573..2343947 (+) | 375 | WP_001087274.1 | DUF2750 domain-containing protein | - |
| EA665_RS11240 (EA665_011240) | - | 2344088..2344519 (+) | 432 | WP_000156920.1 | CBS domain-containing protein | - |
| EA665_RS11245 (EA665_011245) | - | 2344570..2345778 (-) | 1209 | WP_000129946.1 | aspartate aminotransferase family protein | - |
| EA665_RS11250 (EA665_011250) | grxD | 2346006..2346347 (+) | 342 | WP_000138830.1 | Grx4 family monothiol glutaredoxin | - |
| EA665_RS11255 (EA665_011255) | - | 2346394..2346717 (-) | 324 | WP_000121846.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 39905.69 Da Isoelectric Point: 4.9837
>NTDB_id=317484 EA665_RS11215 WP_001187341.1 2340787..2341893(-) (pilA) [Acinetobacter baumannii strain TG31302]
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETDK
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETDK
Nucleotide
Download Length: 1107 bp
>NTDB_id=317484 EA665_RS11215 WP_001187341.1 2340787..2341893(-) (pilA) [Acinetobacter baumannii strain TG31302]
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTTGTCGAGGCTGCACCTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGACGAATGAAAGAAGGCTTGAGCAAAACTCGTCGTAATTTCACC
GATGGTATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTGGTTGCTTTGCTTGCTCCACGCGTGAAGCCTTTACATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACAACAATTGGTAAGTTGGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTTGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGACAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTCGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGCTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGATAAATAA
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTTGTCGAGGCTGCACCTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGACGAATGAAAGAAGGCTTGAGCAAAACTCGTCGTAATTTCACC
GATGGTATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTGGTTGCTTTGCTTGCTCCACGCGTGAAGCCTTTACATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACAACAATTGGTAAGTTGGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTTGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGACAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTCGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGCTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGATAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
52.038 |
86.685 |
0.451 |