Detailed information
Bioinformatically predicted
Overview
| Name | exbB | Type | Machinery gene |
| Locus tag | E7Z57_RS06510 | Genome accession | NZ_CP039339 |
| Coordinates | 1323419..1324039 (-) | Length | 206 a.a. |
| NCBI ID | WP_064048678.1 | Uniprot ID | - |
| Organism | Ralstonia pseudosolanacearum strain UW386 | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1318419..1329039
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E7Z57_RS06480 (E7Z57_06480) | - | 1318920..1319678 (-) | 759 | WP_064048673.1 | 3-hydroxyacyl-CoA dehydrogenase | - |
| E7Z57_RS06485 (E7Z57_06485) | adk | 1319838..1320506 (-) | 669 | WP_138928734.1 | adenylate kinase | - |
| E7Z57_RS06490 (E7Z57_06490) | kdsB | 1320826..1321632 (-) | 807 | WP_064048675.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| E7Z57_RS06495 (E7Z57_06495) | - | 1321651..1321839 (-) | 189 | WP_003266270.1 | Trm112 family protein | - |
| E7Z57_RS06500 (E7Z57_06500) | lpxK | 1321900..1322949 (-) | 1050 | WP_064048676.1 | tetraacyldisaccharide 4'-kinase | - |
| E7Z57_RS06505 (E7Z57_06505) | - | 1322965..1323396 (-) | 432 | WP_064048677.1 | ExbD/TolR family protein | - |
| E7Z57_RS06510 (E7Z57_06510) | exbB | 1323419..1324039 (-) | 621 | WP_064048678.1 | MotA/TolQ/ExbB proton channel family protein | Machinery gene |
| E7Z57_RS06515 (E7Z57_06515) | xseA | 1325651..1327066 (+) | 1416 | WP_138928735.1 | exodeoxyribonuclease VII large subunit | - |
| E7Z57_RS06520 (E7Z57_06520) | sodB | 1327212..1327790 (+) | 579 | WP_064048681.1 | superoxide dismutase [Fe] | - |
Sequence
Protein
Download Length: 206 a.a. Molecular weight: 22288.15 Da Isoelectric Point: 9.3208
>NTDB_id=317330 E7Z57_RS06510 WP_064048678.1 1323419..1324039(-) (exbB) [Ralstonia pseudosolanacearum strain UW386]
MFSIIQAAGWPIWPLLIASVLALALIIERFVALQRKKIIPPKVYDEALAVAHQRKATPEVVNTLEQGSPLGRVLAAALRH
VVLHPATTREAAKEVVEEAGQNVTHRLERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQALAHGISVALYN
TALGLVVAIPTLIFWRYFRGVVDSYVVELEHLSATYLDAILPPRRG
MFSIIQAAGWPIWPLLIASVLALALIIERFVALQRKKIIPPKVYDEALAVAHQRKATPEVVNTLEQGSPLGRVLAAALRH
VVLHPATTREAAKEVVEEAGQNVTHRLERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQALAHGISVALYN
TALGLVVAIPTLIFWRYFRGVVDSYVVELEHLSATYLDAILPPRRG
Nucleotide
Download Length: 621 bp
>NTDB_id=317330 E7Z57_RS06510 WP_064048678.1 1323419..1324039(-) (exbB) [Ralstonia pseudosolanacearum strain UW386]
GTGTTTTCCATCATCCAAGCCGCCGGCTGGCCGATCTGGCCGCTGCTGATTGCCTCGGTGCTCGCCCTGGCGCTCATCAT
CGAACGCTTCGTCGCCTTGCAGCGCAAGAAGATCATTCCTCCCAAGGTGTATGACGAGGCCCTGGCGGTGGCACACCAGC
GCAAGGCGACGCCGGAAGTCGTGAACACGCTGGAACAGGGTTCGCCGCTGGGCCGCGTGCTGGCCGCCGCGCTGCGCCAC
GTGGTGCTGCATCCGGCCACCACGCGCGAAGCCGCCAAGGAAGTGGTGGAAGAAGCCGGCCAGAACGTCACCCACCGCCT
GGAGCGCTACCTGAACGCACTCGGCACCATCGCCTCGGTGGCGCCGCTGATGGGCCTGTTCGGCACCGTGGTCGGCATGA
TCGAGATCTTCGGCAGCCAGACCGCCGCCGGCACCAACCCGCAGGCGCTCGCGCACGGCATCTCGGTCGCGCTGTACAAC
ACGGCGCTGGGGCTGGTGGTGGCCATCCCGACGCTGATCTTCTGGCGCTACTTCCGTGGCGTGGTCGACAGCTACGTGGT
CGAGCTCGAGCACCTGTCCGCCACGTACCTCGACGCGATCCTGCCGCCGCGGCGCGGCTGA
GTGTTTTCCATCATCCAAGCCGCCGGCTGGCCGATCTGGCCGCTGCTGATTGCCTCGGTGCTCGCCCTGGCGCTCATCAT
CGAACGCTTCGTCGCCTTGCAGCGCAAGAAGATCATTCCTCCCAAGGTGTATGACGAGGCCCTGGCGGTGGCACACCAGC
GCAAGGCGACGCCGGAAGTCGTGAACACGCTGGAACAGGGTTCGCCGCTGGGCCGCGTGCTGGCCGCCGCGCTGCGCCAC
GTGGTGCTGCATCCGGCCACCACGCGCGAAGCCGCCAAGGAAGTGGTGGAAGAAGCCGGCCAGAACGTCACCCACCGCCT
GGAGCGCTACCTGAACGCACTCGGCACCATCGCCTCGGTGGCGCCGCTGATGGGCCTGTTCGGCACCGTGGTCGGCATGA
TCGAGATCTTCGGCAGCCAGACCGCCGCCGGCACCAACCCGCAGGCGCTCGCGCACGGCATCTCGGTCGCGCTGTACAAC
ACGGCGCTGGGGCTGGTGGTGGCCATCCCGACGCTGATCTTCTGGCGCTACTTCCGTGGCGTGGTCGACAGCTACGTGGT
CGAGCTCGAGCACCTGTCCGCCACGTACCTCGACGCGATCCTGCCGCCGCGGCGCGGCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| exbB | Pseudomonas stutzeri DSM 10701 |
40.488 |
99.515 |
0.403 |