Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | D7I46_RS00585 | Genome accession | NZ_CP032627 |
| Coordinates | 103020..105470 (+) | Length | 816 a.a. |
| NCBI ID | WP_120771106.1 | Uniprot ID | A0A387BFH0 |
| Organism | Lactococcus allomyrinae strain 1JSPR-7 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 98020..110470
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D7I46_RS00565 (D7I46_00565) | rpoE | 98802..99362 (+) | 561 | WP_120771103.1 | DNA-directed RNA polymerase subunit delta | - |
| D7I46_RS00570 (D7I46_00570) | mltG | 99888..101501 (+) | 1614 | WP_120771104.1 | endolytic transglycosylase MltG | - |
| D7I46_RS00575 (D7I46_00575) | greA | 101613..102083 (+) | 471 | WP_120771105.1 | transcription elongation factor GreA | - |
| D7I46_RS00580 (D7I46_00580) | - | 102578..103030 (+) | 453 | WP_120773240.1 | CtsR family transcriptional regulator | - |
| D7I46_RS00585 (D7I46_00585) | clpC | 103020..105470 (+) | 2451 | WP_120771106.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| D7I46_RS00590 (D7I46_00590) | hpf | 105618..106175 (+) | 558 | WP_120771107.1 | ribosome hibernation-promoting factor, HPF/YfiA family | - |
| D7I46_RS00595 (D7I46_00595) | eno | 106421..107722 (+) | 1302 | WP_057720322.1 | surface-displayed alpha-enolase | - |
| D7I46_RS00600 (D7I46_00600) | - | 108291..109208 (+) | 918 | WP_162930782.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 816 a.a. Molecular weight: 90384.03 Da Isoelectric Point: 6.9617
>NTDB_id=317289 D7I46_RS00585 WP_120771106.1 103020..105470(+) (clpC) [Lactococcus allomyrinae strain 1JSPR-7]
MKFENIEYTTTVEQILDKAAEYAYYYQYGAIESAHILAAMTTTAGSIAFSVLAGMKVDSSDLLIDVEDLSSHVVVKREKL
RFSPRAEEIIQLAGLLAIHNGAKVVGTEHLLYALLQIEDGFALQLLKLQKVNIVSVRKELEKRTGLKIPEARKTVTPMSK
RNLAKRVSATSTTPTLDSVSSDLTESAREGKLDPMIGREAEVERLIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRIVT
GDVPVGLMNSRIMALNMATVVAGTKFRGEFEDRLTAIVEEVSSDPDVIIFIDELHTIIGAGGGMDSVNDAANILKPALAR
GDFQMIGATTYHEYQKYIEKDEALERRLARINVEEPTTDEAISILQGLKEKFEDYHRVAFTDEAIKSAVTLSVRYMTNRK
LPDKAIDLLDEAAASVKISVKNQQTKRLELEKELTEAKKELAESVIQLDVKASREKEKVVQKIADKINKFSVSTDKKQEV
TDKAVIAVASTLTGVPITQMTKSESERLIKLEQELHKRVVGQEEAISAVSRAIRRARSGVSDSRRPMGSFMFLGPTGVGK
TELAKALADSVFGSEDSMIRVDMSEYMEKHSTSRLIGAPPGYVGYDEGGQLTERVRNKPYSVILLDEVEKAHPDVFNIML
QILDDGFVTDTKGRKVDFRNTIIIMTSNLGATALRDDKTVGFGAKDISADYKAMKARILEELKRHYRPEFLNRIDETIVF
HPLATHEIEQIVKIMSKSLIKRLSEQKVHIKLTSAAAKLIAEVGFDPEYGARPLRKALQREVEDVLSEQLLTGEIKSGDS
ISIGVANKKIKITHII
MKFENIEYTTTVEQILDKAAEYAYYYQYGAIESAHILAAMTTTAGSIAFSVLAGMKVDSSDLLIDVEDLSSHVVVKREKL
RFSPRAEEIIQLAGLLAIHNGAKVVGTEHLLYALLQIEDGFALQLLKLQKVNIVSVRKELEKRTGLKIPEARKTVTPMSK
RNLAKRVSATSTTPTLDSVSSDLTESAREGKLDPMIGREAEVERLIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRIVT
GDVPVGLMNSRIMALNMATVVAGTKFRGEFEDRLTAIVEEVSSDPDVIIFIDELHTIIGAGGGMDSVNDAANILKPALAR
GDFQMIGATTYHEYQKYIEKDEALERRLARINVEEPTTDEAISILQGLKEKFEDYHRVAFTDEAIKSAVTLSVRYMTNRK
LPDKAIDLLDEAAASVKISVKNQQTKRLELEKELTEAKKELAESVIQLDVKASREKEKVVQKIADKINKFSVSTDKKQEV
TDKAVIAVASTLTGVPITQMTKSESERLIKLEQELHKRVVGQEEAISAVSRAIRRARSGVSDSRRPMGSFMFLGPTGVGK
TELAKALADSVFGSEDSMIRVDMSEYMEKHSTSRLIGAPPGYVGYDEGGQLTERVRNKPYSVILLDEVEKAHPDVFNIML
QILDDGFVTDTKGRKVDFRNTIIIMTSNLGATALRDDKTVGFGAKDISADYKAMKARILEELKRHYRPEFLNRIDETIVF
HPLATHEIEQIVKIMSKSLIKRLSEQKVHIKLTSAAAKLIAEVGFDPEYGARPLRKALQREVEDVLSEQLLTGEIKSGDS
ISIGVANKKIKITHII
Nucleotide
Download Length: 2451 bp
>NTDB_id=317289 D7I46_RS00585 WP_120771106.1 103020..105470(+) (clpC) [Lactococcus allomyrinae strain 1JSPR-7]
ATGAAATTTGAAAATATAGAATACACAACTACTGTAGAGCAAATACTTGATAAGGCAGCAGAGTATGCTTACTATTATCA
GTATGGTGCAATTGAAAGTGCTCATATTTTAGCAGCAATGACAACGACTGCTGGCTCGATTGCTTTTAGTGTACTTGCCG
GAATGAAAGTTGATTCCTCAGATTTATTGATTGATGTGGAAGATTTATCTAGCCATGTTGTTGTTAAACGTGAAAAGTTA
AGATTTTCTCCTAGAGCAGAAGAAATTATTCAATTGGCGGGACTTTTAGCGATACACAATGGAGCTAAGGTTGTAGGCAC
AGAACACCTTCTTTATGCTCTTTTACAAATTGAGGATGGTTTTGCATTGCAACTGTTGAAATTGCAAAAAGTGAATATCG
TATCTGTCAGAAAAGAGTTAGAAAAGCGGACGGGTCTAAAGATACCCGAAGCTAGGAAAACAGTCACACCAATGTCTAAG
AGAAACCTTGCTAAACGAGTTTCAGCGACGTCCACAACACCAACTCTGGACTCAGTTTCTTCTGATTTGACAGAATCTGC
ACGCGAAGGAAAGCTTGACCCAATGATTGGTCGTGAGGCTGAAGTCGAACGTTTGATTCATATATTAAGTCGACGGACGA
AAAATAATCCTGTGCTTGTTGGAGAACCTGGAGTAGGTAAATCAGCGATTATTGAAGGTCTGGCTCAACGTATTGTAACA
GGAGATGTTCCAGTTGGACTGATGAATAGTCGGATTATGGCATTAAATATGGCGACTGTTGTTGCTGGTACAAAATTTCG
AGGAGAATTTGAAGACCGTTTGACAGCAATTGTAGAAGAAGTAAGTAGCGACCCAGATGTTATTATTTTCATTGATGAAC
TTCATACAATTATCGGTGCAGGTGGTGGCATGGATTCAGTCAATGATGCGGCAAATATTTTGAAACCAGCACTTGCGCGA
GGTGATTTTCAAATGATAGGTGCAACAACTTATCATGAATATCAAAAATATATTGAAAAAGATGAAGCATTGGAACGTCG
CCTTGCTAGGATAAATGTTGAAGAACCAACAACTGACGAAGCTATTTCTATCCTTCAAGGCTTGAAAGAAAAATTTGAAG
ATTACCATAGGGTTGCATTTACTGACGAAGCCATCAAAAGTGCTGTGACTTTGAGTGTTCGTTACATGACAAATAGAAAA
TTACCTGACAAAGCTATTGACTTACTCGATGAGGCGGCGGCATCAGTAAAAATTTCTGTAAAAAATCAACAAACGAAACG
CTTAGAACTCGAAAAAGAACTGACAGAAGCCAAAAAAGAATTAGCAGAATCAGTCATTCAACTTGATGTGAAAGCGTCAC
GAGAAAAAGAAAAAGTTGTTCAAAAGATTGCTGACAAGATTAATAAATTTTCTGTCAGCACTGACAAAAAACAAGAAGTC
ACTGATAAAGCTGTCATTGCTGTTGCTTCAACACTGACAGGAGTTCCAATCACTCAAATGACAAAATCTGAAAGTGAACG
CCTGATTAAACTTGAGCAAGAACTTCATAAACGAGTTGTTGGACAAGAAGAAGCGATTTCAGCAGTATCAAGAGCAATTA
GACGAGCAAGATCAGGTGTCTCAGATAGCCGAAGACCAATGGGATCCTTTATGTTTCTCGGTCCAACAGGTGTTGGTAAG
ACAGAACTTGCAAAAGCACTAGCTGACAGTGTCTTTGGAAGTGAGGATAGCATGATTCGCGTGGATATGAGTGAATACAT
GGAAAAACACTCAACTTCTCGTTTGATTGGAGCACCTCCAGGATATGTTGGATATGATGAAGGTGGGCAACTAACAGAGC
GTGTCCGCAATAAACCGTACTCTGTGATTTTACTTGATGAGGTTGAAAAAGCTCATCCAGATGTCTTCAATATTATGTTG
CAAATTCTTGATGATGGATTTGTCACAGATACAAAAGGAAGAAAAGTTGACTTTAGAAACACAATTATCATCATGACTTC
GAACCTTGGGGCAACAGCATTACGTGACGATAAAACCGTTGGATTTGGAGCAAAAGATATCTCCGCTGATTATAAAGCAA
TGAAAGCACGGATTCTCGAAGAATTAAAACGCCACTATCGTCCAGAGTTTCTCAATCGAATTGATGAAACAATCGTCTTC
CACCCACTTGCTACCCATGAAATTGAACAGATAGTAAAAATTATGAGTAAATCTCTCATCAAACGACTGTCAGAGCAAAA
AGTTCACATTAAACTCACATCAGCAGCAGCAAAACTGATTGCAGAAGTTGGATTTGACCCTGAATATGGGGCTCGTCCTT
TGCGTAAAGCGCTCCAACGCGAAGTAGAAGATGTTTTGAGTGAACAACTTCTGACAGGAGAAATCAAGTCTGGCGATAGT
ATTTCTATCGGTGTGGCTAATAAAAAGATTAAAATCACTCATATTATTTGA
ATGAAATTTGAAAATATAGAATACACAACTACTGTAGAGCAAATACTTGATAAGGCAGCAGAGTATGCTTACTATTATCA
GTATGGTGCAATTGAAAGTGCTCATATTTTAGCAGCAATGACAACGACTGCTGGCTCGATTGCTTTTAGTGTACTTGCCG
GAATGAAAGTTGATTCCTCAGATTTATTGATTGATGTGGAAGATTTATCTAGCCATGTTGTTGTTAAACGTGAAAAGTTA
AGATTTTCTCCTAGAGCAGAAGAAATTATTCAATTGGCGGGACTTTTAGCGATACACAATGGAGCTAAGGTTGTAGGCAC
AGAACACCTTCTTTATGCTCTTTTACAAATTGAGGATGGTTTTGCATTGCAACTGTTGAAATTGCAAAAAGTGAATATCG
TATCTGTCAGAAAAGAGTTAGAAAAGCGGACGGGTCTAAAGATACCCGAAGCTAGGAAAACAGTCACACCAATGTCTAAG
AGAAACCTTGCTAAACGAGTTTCAGCGACGTCCACAACACCAACTCTGGACTCAGTTTCTTCTGATTTGACAGAATCTGC
ACGCGAAGGAAAGCTTGACCCAATGATTGGTCGTGAGGCTGAAGTCGAACGTTTGATTCATATATTAAGTCGACGGACGA
AAAATAATCCTGTGCTTGTTGGAGAACCTGGAGTAGGTAAATCAGCGATTATTGAAGGTCTGGCTCAACGTATTGTAACA
GGAGATGTTCCAGTTGGACTGATGAATAGTCGGATTATGGCATTAAATATGGCGACTGTTGTTGCTGGTACAAAATTTCG
AGGAGAATTTGAAGACCGTTTGACAGCAATTGTAGAAGAAGTAAGTAGCGACCCAGATGTTATTATTTTCATTGATGAAC
TTCATACAATTATCGGTGCAGGTGGTGGCATGGATTCAGTCAATGATGCGGCAAATATTTTGAAACCAGCACTTGCGCGA
GGTGATTTTCAAATGATAGGTGCAACAACTTATCATGAATATCAAAAATATATTGAAAAAGATGAAGCATTGGAACGTCG
CCTTGCTAGGATAAATGTTGAAGAACCAACAACTGACGAAGCTATTTCTATCCTTCAAGGCTTGAAAGAAAAATTTGAAG
ATTACCATAGGGTTGCATTTACTGACGAAGCCATCAAAAGTGCTGTGACTTTGAGTGTTCGTTACATGACAAATAGAAAA
TTACCTGACAAAGCTATTGACTTACTCGATGAGGCGGCGGCATCAGTAAAAATTTCTGTAAAAAATCAACAAACGAAACG
CTTAGAACTCGAAAAAGAACTGACAGAAGCCAAAAAAGAATTAGCAGAATCAGTCATTCAACTTGATGTGAAAGCGTCAC
GAGAAAAAGAAAAAGTTGTTCAAAAGATTGCTGACAAGATTAATAAATTTTCTGTCAGCACTGACAAAAAACAAGAAGTC
ACTGATAAAGCTGTCATTGCTGTTGCTTCAACACTGACAGGAGTTCCAATCACTCAAATGACAAAATCTGAAAGTGAACG
CCTGATTAAACTTGAGCAAGAACTTCATAAACGAGTTGTTGGACAAGAAGAAGCGATTTCAGCAGTATCAAGAGCAATTA
GACGAGCAAGATCAGGTGTCTCAGATAGCCGAAGACCAATGGGATCCTTTATGTTTCTCGGTCCAACAGGTGTTGGTAAG
ACAGAACTTGCAAAAGCACTAGCTGACAGTGTCTTTGGAAGTGAGGATAGCATGATTCGCGTGGATATGAGTGAATACAT
GGAAAAACACTCAACTTCTCGTTTGATTGGAGCACCTCCAGGATATGTTGGATATGATGAAGGTGGGCAACTAACAGAGC
GTGTCCGCAATAAACCGTACTCTGTGATTTTACTTGATGAGGTTGAAAAAGCTCATCCAGATGTCTTCAATATTATGTTG
CAAATTCTTGATGATGGATTTGTCACAGATACAAAAGGAAGAAAAGTTGACTTTAGAAACACAATTATCATCATGACTTC
GAACCTTGGGGCAACAGCATTACGTGACGATAAAACCGTTGGATTTGGAGCAAAAGATATCTCCGCTGATTATAAAGCAA
TGAAAGCACGGATTCTCGAAGAATTAAAACGCCACTATCGTCCAGAGTTTCTCAATCGAATTGATGAAACAATCGTCTTC
CACCCACTTGCTACCCATGAAATTGAACAGATAGTAAAAATTATGAGTAAATCTCTCATCAAACGACTGTCAGAGCAAAA
AGTTCACATTAAACTCACATCAGCAGCAGCAAAACTGATTGCAGAAGTTGGATTTGACCCTGAATATGGGGCTCGTCCTT
TGCGTAAAGCGCTCCAACGCGAAGTAGAAGATGTTTTGAGTGAACAACTTCTGACAGGAGAAATCAAGTCTGGCGATAGT
ATTTCTATCGGTGTGGCTAATAAAAAGATTAAAATCACTCATATTATTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
85.907 |
100 |
0.859 |
| clpC | Streptococcus thermophilus LMD-9 |
50.18 |
100 |
0.513 |
| clpC | Streptococcus thermophilus LMG 18311 |
50.18 |
100 |
0.513 |
| clpC | Streptococcus pneumoniae TIGR4 |
48.792 |
100 |
0.495 |
| clpC | Streptococcus pneumoniae Rx1 |
48.792 |
100 |
0.495 |
| clpC | Streptococcus pneumoniae D39 |
48.792 |
100 |
0.495 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
49.938 |
98.652 |
0.493 |
| clpC | Streptococcus mutans UA159 |
47.596 |
100 |
0.485 |
| clpE | Streptococcus pneumoniae Rx1 |
47.5 |
78.431 |
0.373 |
| clpE | Streptococcus pneumoniae D39 |
47.5 |
78.431 |
0.373 |
| clpE | Streptococcus pneumoniae R6 |
47.5 |
78.431 |
0.373 |
| clpE | Streptococcus pneumoniae TIGR4 |
47.344 |
78.431 |
0.371 |
| clpE | Streptococcus mutans UA159 |
47.84 |
76.593 |
0.366 |