Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | D7I46_RS00205 | Genome accession | NZ_CP032627 |
| Coordinates | 31021..33279 (+) | Length | 752 a.a. |
| NCBI ID | WP_120771039.1 | Uniprot ID | A0A387BFG1 |
| Organism | Lactococcus allomyrinae strain 1JSPR-7 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 26021..38279
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D7I46_RS00190 (D7I46_00190) | dnaG | 26758..28632 (+) | 1875 | WP_120771036.1 | DNA primase | - |
| D7I46_RS00195 (D7I46_00195) | rpoD | 28686..30029 (+) | 1344 | WP_120771037.1 | RNA polymerase sigma factor RpoD | - |
| D7I46_RS00200 (D7I46_00200) | - | 30485..30811 (+) | 327 | WP_120771038.1 | hypothetical protein | - |
| D7I46_RS00205 (D7I46_00205) | clpC | 31021..33279 (+) | 2259 | WP_120771039.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| D7I46_RS00210 (D7I46_00210) | - | 33491..33937 (+) | 447 | WP_162930776.1 | PepSY domain-containing protein | - |
| D7I46_RS00215 (D7I46_00215) | - | 33989..34459 (-) | 471 | WP_120771041.1 | Rrf2 family transcriptional regulator | - |
| D7I46_RS00220 (D7I46_00220) | gap | 35046..36059 (+) | 1014 | WP_120771042.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| D7I46_RS00225 (D7I46_00225) | def | 36293..36883 (-) | 591 | WP_420844009.1 | peptide deformylase | - |
| D7I46_RS00230 (D7I46_00230) | - | 37544..37828 (+) | 285 | WP_120771043.1 | NUDIX domain-containing protein | - |
| D7I46_RS13610 | - | 37853..37987 (+) | 135 | WP_276116981.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 752 a.a. Molecular weight: 83737.52 Da Isoelectric Point: 4.7325
>NTDB_id=317288 D7I46_RS00205 WP_120771039.1 31021..33279(+) (clpC) [Lactococcus allomyrinae strain 1JSPR-7]
MLCQNCNINEATIHLYTNVNGQKKQTDLCQNCYQIMKSGGQEALFGTNNNGTRGDMDEPFNPFNDIFSALHGNDLPNGPG
TPQNPVPPTQAGGRGPRGPQNPRTKQPKGMLEEFGINVTDSARRGEIDPVIGRDEEIKRVIEILNRRTKNNPVLIGEPGV
GKTAVVEGLAQKIVDGDVPQKLQNKEVIRLDVVSLVQGTGIRGQFEERMQKLMDEIRKRNDVIMFIDEIHEIVGAGSAGD
GNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVDETITILRGIQPRYEDYHHVKYTDEAIE
AAAHLSNRYIQDRFLPDKAIDLLDESGSKKNLTLKFVDPEDIKNRINQAEQQKNGAMRTEDFEKAAHFRDQIAKLRELQN
HEVSDDEIPVITEKDIEQIVEQKTHIPVGDLKEKEQTQLIHLAEDLKAHVIGQDEAVDKISKAIRRSRVGLGKPNRPIGS
FLFVGPTGVGKTELAKQLAQELFGSADSMVRFDMSEYMEKHSVAKLIGAPPGYVGYEEAGQLTEQVRRNPYTLILLDEIE
KAHPDVMHMFLQILDDGRLTDAQGRTVSFKDAIIIMTSNAGTGKAEANVGFGAAREGRTNSVLGQLGDFFSPEFMNRFDG
IIEFSALSKENLLKIVDLMLAEVNEQIGRNEIHLEVTQTVKEKLVDLGYDPAMGARPLRRTIQDHIEDAIADFYIEHPEY
KNLVADLIDDEIVISNQAQEPAETADEEISAE
MLCQNCNINEATIHLYTNVNGQKKQTDLCQNCYQIMKSGGQEALFGTNNNGTRGDMDEPFNPFNDIFSALHGNDLPNGPG
TPQNPVPPTQAGGRGPRGPQNPRTKQPKGMLEEFGINVTDSARRGEIDPVIGRDEEIKRVIEILNRRTKNNPVLIGEPGV
GKTAVVEGLAQKIVDGDVPQKLQNKEVIRLDVVSLVQGTGIRGQFEERMQKLMDEIRKRNDVIMFIDEIHEIVGAGSAGD
GNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVDETITILRGIQPRYEDYHHVKYTDEAIE
AAAHLSNRYIQDRFLPDKAIDLLDESGSKKNLTLKFVDPEDIKNRINQAEQQKNGAMRTEDFEKAAHFRDQIAKLRELQN
HEVSDDEIPVITEKDIEQIVEQKTHIPVGDLKEKEQTQLIHLAEDLKAHVIGQDEAVDKISKAIRRSRVGLGKPNRPIGS
FLFVGPTGVGKTELAKQLAQELFGSADSMVRFDMSEYMEKHSVAKLIGAPPGYVGYEEAGQLTEQVRRNPYTLILLDEIE
KAHPDVMHMFLQILDDGRLTDAQGRTVSFKDAIIIMTSNAGTGKAEANVGFGAAREGRTNSVLGQLGDFFSPEFMNRFDG
IIEFSALSKENLLKIVDLMLAEVNEQIGRNEIHLEVTQTVKEKLVDLGYDPAMGARPLRRTIQDHIEDAIADFYIEHPEY
KNLVADLIDDEIVISNQAQEPAETADEEISAE
Nucleotide
Download Length: 2259 bp
>NTDB_id=317288 D7I46_RS00205 WP_120771039.1 31021..33279(+) (clpC) [Lactococcus allomyrinae strain 1JSPR-7]
ATGCTTTGTCAAAATTGTAATATCAACGAGGCGACCATTCACCTCTATACAAATGTTAATGGTCAGAAAAAACAAACAGA
CCTTTGCCAAAATTGTTATCAAATCATGAAATCTGGTGGACAAGAGGCGCTATTCGGTACAAATAATAATGGTACTAGGG
GAGATATGGACGAACCATTCAACCCATTTAATGATATTTTTAGTGCATTACATGGTAATGATTTGCCAAATGGGCCAGGT
ACACCTCAAAATCCAGTTCCTCCTACTCAAGCAGGAGGGCGTGGTCCGCGGGGTCCGCAAAATCCTAGAACTAAACAGCC
TAAGGGAATGCTTGAAGAATTTGGAATTAATGTGACAGATAGCGCACGTCGTGGCGAAATTGACCCTGTCATCGGTCGTG
ATGAAGAAATTAAACGTGTCATTGAAATTCTCAATCGACGGACGAAAAATAATCCTGTGTTGATTGGAGAACCTGGTGTT
GGTAAAACAGCAGTTGTTGAAGGTTTGGCGCAAAAGATTGTGGATGGAGATGTTCCACAAAAGTTGCAGAATAAAGAAGT
CATCCGACTTGATGTGGTCAGTCTAGTGCAAGGCACAGGTATTCGTGGACAATTTGAAGAACGAATGCAAAAACTGATGG
ATGAAATCAGAAAGCGCAATGATGTCATCATGTTCATTGACGAAATCCATGAAATTGTTGGTGCTGGCTCTGCTGGTGAT
GGAAATATGGATGCTGGAAATATCCTAAAACCTGCACTTGCCCGTGGTGAGCTACAATTAGTTGGAGCTACAACGCTTAA
CGAATATCGGATTATTGAAAAAGATGCAGCGCTTGAGCGTAGGATGCAGCCTGTGAAGGTTGATGAGCCTTCAGTTGATG
AAACAATCACGATTTTGCGGGGAATTCAACCGCGCTACGAAGATTATCATCATGTAAAATATACAGATGAAGCGATTGAA
GCAGCGGCACATTTGTCTAATCGCTATATCCAAGACCGTTTCTTGCCAGACAAGGCGATTGACCTTTTGGATGAATCAGG
TTCAAAGAAAAATTTAACTTTGAAATTTGTCGACCCTGAGGATATCAAAAATCGGATTAATCAAGCAGAACAACAAAAAA
ATGGAGCGATGCGTACTGAAGATTTTGAAAAGGCAGCTCATTTCCGTGACCAGATTGCGAAATTGCGTGAATTGCAAAAT
CATGAAGTTTCAGACGATGAAATTCCTGTGATTACAGAAAAAGACATTGAACAGATTGTTGAACAAAAAACGCACATCCC
TGTCGGCGATTTGAAAGAAAAGGAACAGACTCAGCTGATTCATTTGGCAGAAGACTTGAAAGCACACGTCATTGGGCAAG
ATGAAGCAGTAGATAAGATTTCTAAAGCTATTCGTCGGAGTCGTGTTGGTTTGGGCAAACCCAACCGCCCAATTGGTTCT
TTTCTCTTTGTTGGGCCTACTGGTGTTGGTAAGACGGAGCTTGCTAAACAATTGGCACAAGAACTTTTTGGTTCAGCAGA
TAGTATGGTTCGTTTTGATATGTCGGAATACATGGAAAAACATAGTGTGGCGAAATTGATTGGAGCGCCTCCAGGATATG
TCGGCTATGAGGAAGCGGGGCAATTGACTGAACAAGTAAGACGTAATCCTTACACTCTGATTTTGCTTGATGAGATTGAG
AAAGCTCATCCAGATGTGATGCATATGTTCTTGCAAATCCTTGATGATGGACGTTTAACGGATGCTCAAGGACGTACAGT
TAGCTTTAAAGATGCTATTATCATCATGACATCAAACGCTGGTACAGGTAAGGCTGAAGCCAACGTTGGTTTTGGTGCAG
CACGCGAAGGTCGGACGAATTCAGTGCTTGGACAACTTGGTGATTTCTTCAGTCCTGAGTTCATGAATCGTTTTGATGGT
ATCATCGAATTTTCTGCTTTATCTAAGGAAAATCTGTTGAAGATTGTGGATTTGATGCTTGCTGAAGTTAACGAACAAAT
TGGTCGCAATGAAATTCATCTTGAAGTGACACAGACTGTTAAGGAAAAATTAGTTGACCTCGGATATGACCCAGCGATGG
GTGCGCGCCCACTTCGTAGAACGATTCAAGATCATATAGAAGATGCGATTGCTGATTTTTACATCGAACATCCAGAATAT
AAAAACTTGGTTGCTGATTTGATTGATGATGAGATTGTAATTTCAAATCAAGCACAGGAACCTGCTGAAACGGCGGATGA
AGAAATTTCAGCAGAGTAG
ATGCTTTGTCAAAATTGTAATATCAACGAGGCGACCATTCACCTCTATACAAATGTTAATGGTCAGAAAAAACAAACAGA
CCTTTGCCAAAATTGTTATCAAATCATGAAATCTGGTGGACAAGAGGCGCTATTCGGTACAAATAATAATGGTACTAGGG
GAGATATGGACGAACCATTCAACCCATTTAATGATATTTTTAGTGCATTACATGGTAATGATTTGCCAAATGGGCCAGGT
ACACCTCAAAATCCAGTTCCTCCTACTCAAGCAGGAGGGCGTGGTCCGCGGGGTCCGCAAAATCCTAGAACTAAACAGCC
TAAGGGAATGCTTGAAGAATTTGGAATTAATGTGACAGATAGCGCACGTCGTGGCGAAATTGACCCTGTCATCGGTCGTG
ATGAAGAAATTAAACGTGTCATTGAAATTCTCAATCGACGGACGAAAAATAATCCTGTGTTGATTGGAGAACCTGGTGTT
GGTAAAACAGCAGTTGTTGAAGGTTTGGCGCAAAAGATTGTGGATGGAGATGTTCCACAAAAGTTGCAGAATAAAGAAGT
CATCCGACTTGATGTGGTCAGTCTAGTGCAAGGCACAGGTATTCGTGGACAATTTGAAGAACGAATGCAAAAACTGATGG
ATGAAATCAGAAAGCGCAATGATGTCATCATGTTCATTGACGAAATCCATGAAATTGTTGGTGCTGGCTCTGCTGGTGAT
GGAAATATGGATGCTGGAAATATCCTAAAACCTGCACTTGCCCGTGGTGAGCTACAATTAGTTGGAGCTACAACGCTTAA
CGAATATCGGATTATTGAAAAAGATGCAGCGCTTGAGCGTAGGATGCAGCCTGTGAAGGTTGATGAGCCTTCAGTTGATG
AAACAATCACGATTTTGCGGGGAATTCAACCGCGCTACGAAGATTATCATCATGTAAAATATACAGATGAAGCGATTGAA
GCAGCGGCACATTTGTCTAATCGCTATATCCAAGACCGTTTCTTGCCAGACAAGGCGATTGACCTTTTGGATGAATCAGG
TTCAAAGAAAAATTTAACTTTGAAATTTGTCGACCCTGAGGATATCAAAAATCGGATTAATCAAGCAGAACAACAAAAAA
ATGGAGCGATGCGTACTGAAGATTTTGAAAAGGCAGCTCATTTCCGTGACCAGATTGCGAAATTGCGTGAATTGCAAAAT
CATGAAGTTTCAGACGATGAAATTCCTGTGATTACAGAAAAAGACATTGAACAGATTGTTGAACAAAAAACGCACATCCC
TGTCGGCGATTTGAAAGAAAAGGAACAGACTCAGCTGATTCATTTGGCAGAAGACTTGAAAGCACACGTCATTGGGCAAG
ATGAAGCAGTAGATAAGATTTCTAAAGCTATTCGTCGGAGTCGTGTTGGTTTGGGCAAACCCAACCGCCCAATTGGTTCT
TTTCTCTTTGTTGGGCCTACTGGTGTTGGTAAGACGGAGCTTGCTAAACAATTGGCACAAGAACTTTTTGGTTCAGCAGA
TAGTATGGTTCGTTTTGATATGTCGGAATACATGGAAAAACATAGTGTGGCGAAATTGATTGGAGCGCCTCCAGGATATG
TCGGCTATGAGGAAGCGGGGCAATTGACTGAACAAGTAAGACGTAATCCTTACACTCTGATTTTGCTTGATGAGATTGAG
AAAGCTCATCCAGATGTGATGCATATGTTCTTGCAAATCCTTGATGATGGACGTTTAACGGATGCTCAAGGACGTACAGT
TAGCTTTAAAGATGCTATTATCATCATGACATCAAACGCTGGTACAGGTAAGGCTGAAGCCAACGTTGGTTTTGGTGCAG
CACGCGAAGGTCGGACGAATTCAGTGCTTGGACAACTTGGTGATTTCTTCAGTCCTGAGTTCATGAATCGTTTTGATGGT
ATCATCGAATTTTCTGCTTTATCTAAGGAAAATCTGTTGAAGATTGTGGATTTGATGCTTGCTGAAGTTAACGAACAAAT
TGGTCGCAATGAAATTCATCTTGAAGTGACACAGACTGTTAAGGAAAAATTAGTTGACCTCGGATATGACCCAGCGATGG
GTGCGCGCCCACTTCGTAGAACGATTCAAGATCATATAGAAGATGCGATTGCTGATTTTTACATCGAACATCCAGAATAT
AAAAACTTGGTTGCTGATTTGATTGATGATGAGATTGTAATTTCAAATCAAGCACAGGAACCTGCTGAAACGGCGGATGA
AGAAATTTCAGCAGAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. cremoris KW2 |
90.027 |
100 |
0.9 |
| clpE | Streptococcus mutans UA159 |
76.821 |
100 |
0.771 |
| clpE | Streptococcus pneumoniae Rx1 |
77.1 |
98.138 |
0.757 |
| clpE | Streptococcus pneumoniae D39 |
77.1 |
98.138 |
0.757 |
| clpE | Streptococcus pneumoniae R6 |
77.1 |
98.138 |
0.757 |
| clpE | Streptococcus pneumoniae TIGR4 |
77.1 |
98.138 |
0.757 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
51.389 |
86.17 |
0.443 |
| clpC | Streptococcus pneumoniae D39 |
46.411 |
83.378 |
0.387 |
| clpC | Streptococcus pneumoniae Rx1 |
46.411 |
83.378 |
0.387 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.411 |
83.378 |
0.387 |
| clpC | Streptococcus mutans UA159 |
44.844 |
85.106 |
0.382 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.493 |
81.516 |
0.379 |
| clpC | Streptococcus thermophilus LMD-9 |
45.779 |
81.915 |
0.375 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.455 |
81.915 |
0.372 |