Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   D7D50_RS06650 Genome accession   NZ_CP032620
Coordinates   1325153..1325446 (+) Length   97 a.a.
NCBI ID   WP_021144391.1    Uniprot ID   -
Organism   Streptococcus koreensis strain KCOM 2890 (=JS71)     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1320153..1330446
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D7D50_RS06635 (D7D50_06635) - 1322397..1323293 (+) 897 WP_120701786.1 hypothetical protein -
  D7D50_RS06640 (D7D50_06640) - 1323427..1324632 (+) 1206 WP_120701787.1 restriction endonuclease subunit S -
  D7D50_RS06645 (D7D50_06645) - 1324798..1325163 (+) 366 WP_120701788.1 type II toxin-antitoxin system RelE/ParE family toxin -
  D7D50_RS06650 (D7D50_06650) HI0659 1325153..1325446 (+) 294 WP_021144391.1 helix-turn-helix domain-containing protein Machinery gene
  D7D50_RS06655 (D7D50_06655) - 1325468..1327069 (+) 1602 WP_120701789.1 type I restriction-modification system subunit M -
  D7D50_RS06660 (D7D50_06660) - 1327219..1328070 (+) 852 WP_120701790.1 VOC family protein -
  D7D50_RS06665 (D7D50_06665) - 1328218..1328757 (+) 540 WP_120701791.1 NADPH-dependent FMN reductase -
  D7D50_RS06670 (D7D50_06670) - 1328787..1329482 (-) 696 WP_120701792.1 VIT1/CCC1 transporter family protein -
  D7D50_RS06675 (D7D50_06675) - 1329718..1330320 (+) 603 WP_120701793.1 hypothetical protein -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10730.48 Da        Isoelectric Point: 5.8962

>NTDB_id=317148 D7D50_RS06650 WP_021144391.1 1325153..1325446(+) (HI0659) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
MKNSAIGSNWKDVRAELFTKEEILESDLRVAIMTELIEARHEKGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLEQEKV

Nucleotide


Download         Length: 294 bp        

>NTDB_id=317148 D7D50_RS06650 WP_021144391.1 1325153..1325446(+) (HI0659) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
ATGAAGAATAGTGCCATCGGTAGCAATTGGAAAGATGTGAGAGCAGAGCTCTTCACCAAGGAAGAAATCCTGGAAAGTGA
TCTGCGGGTCGCGATTATGACAGAGCTGATCGAGGCTCGGCATGAAAAGGGCATTAGCCAAAAGAAACTAGAAGAACTTA
GTGGGGTCAGCCAACCGGTCATTGCTCGGATGGAGACGGGAAAGACCAGTCCTCAATTGGATACGGTCTTGAAAGTCTTA
GCCAGTCTGGGCAAGACCCTCGCTGTCGTCCCACTGGAACAAGAAAAGGTCTAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

60.44

93.814

0.567

Multiple sequence alignment