Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | D7D50_RS03710 | Genome accession | NZ_CP032620 |
| Coordinates | 706448..708877 (+) | Length | 809 a.a. |
| NCBI ID | WP_120701503.1 | Uniprot ID | - |
| Organism | Streptococcus koreensis strain KCOM 2890 (=JS71) | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 701448..713877
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D7D50_RS03700 (D7D50_03700) | - | 702042..705752 (+) | 3711 | WP_120701502.1 | alpha-L-fucosidase | - |
| D7D50_RS03705 (D7D50_03705) | - | 705982..706440 (+) | 459 | WP_042361280.1 | CtsR family transcriptional regulator | - |
| D7D50_RS03710 (D7D50_03710) | clpC | 706448..708877 (+) | 2430 | WP_120701503.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| D7D50_RS03715 (D7D50_03715) | - | 708889..709377 (+) | 489 | WP_120701504.1 | ECF transporter S component | - |
| D7D50_RS03720 (D7D50_03720) | - | 709358..709762 (+) | 405 | WP_120701505.1 | DUF4430 domain-containing protein | - |
| D7D50_RS03725 (D7D50_03725) | - | 709925..710668 (+) | 744 | WP_120701506.1 | hypothetical protein | - |
| D7D50_RS03730 (D7D50_03730) | - | 710874..711932 (+) | 1059 | WP_120701507.1 | AAA family ATPase | - |
| D7D50_RS03735 (D7D50_03735) | pnuC | 711945..712727 (+) | 783 | WP_023024637.1 | nicotinamide riboside transporter PnuC | - |
| D7D50_RS03740 (D7D50_03740) | - | 712728..713525 (+) | 798 | WP_023027350.1 | NUDIX domain-containing protein | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 89840.47 Da Isoelectric Point: 5.7855
>NTDB_id=317137 D7D50_RS03710 WP_120701503.1 706448..708877(+) (clpC) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
MNYSKALLETIEAAQILAGHFDSQTLDTWHILVALANNPYSVAGSVLSDYPMQIDDFQDAAEHITGQVYQRDGRYEVFPF
SFRVEEIMNRSQEIAQAVHAKSLGTEHVLLALLLERGTLASQVLEYVGFRYDDQEDGIKIVELRKSLEQRAGWDKEAVKA
IRSLYRSQQPNRQTMGNMMGMPASTSGGLEDYTRDLTEMACNGSLEPVIGRGQEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPTELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVLIEQPSVADSIAILQGLKKTYERHHRVHITDAAIET
AVVYAHRYLTSRLLPDSAIDLLDEAAATVQNKGPQAGLQSDLTAADQALLKGQWKKVAQLLKEDASPKGYQLEVKEEDIL
KTLSQLSGIPVEKLTQTAAKKYLELEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFLFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRIFEELKKTYRPEFINRIDEKVVFHSLTSD
QMHEIVKIMVKPLIQSLAEKGITLKFQASALKWLATHGYDPEMGARPLRRTIQTQVEDYLAEILLRGEVAEGQTLKVGVK
SGQLNFTID
MNYSKALLETIEAAQILAGHFDSQTLDTWHILVALANNPYSVAGSVLSDYPMQIDDFQDAAEHITGQVYQRDGRYEVFPF
SFRVEEIMNRSQEIAQAVHAKSLGTEHVLLALLLERGTLASQVLEYVGFRYDDQEDGIKIVELRKSLEQRAGWDKEAVKA
IRSLYRSQQPNRQTMGNMMGMPASTSGGLEDYTRDLTEMACNGSLEPVIGRGQEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPTELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVLIEQPSVADSIAILQGLKKTYERHHRVHITDAAIET
AVVYAHRYLTSRLLPDSAIDLLDEAAATVQNKGPQAGLQSDLTAADQALLKGQWKKVAQLLKEDASPKGYQLEVKEEDIL
KTLSQLSGIPVEKLTQTAAKKYLELEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFLFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRIFEELKKTYRPEFINRIDEKVVFHSLTSD
QMHEIVKIMVKPLIQSLAEKGITLKFQASALKWLATHGYDPEMGARPLRRTIQTQVEDYLAEILLRGEVAEGQTLKVGVK
SGQLNFTID
Nucleotide
Download Length: 2430 bp
>NTDB_id=317137 D7D50_RS03710 WP_120701503.1 706448..708877(+) (clpC) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
ATGAACTATTCAAAAGCCCTATTAGAAACGATTGAAGCCGCTCAAATCTTGGCGGGTCATTTTGATTCCCAAACCCTAGA
TACCTGGCATATCCTAGTGGCCCTAGCAAATAACCCCTATAGTGTAGCTGGTTCCGTCTTAAGTGACTATCCTATGCAGA
TTGATGATTTTCAAGACGCAGCTGAGCACATCACGGGCCAAGTCTACCAACGGGATGGTCGCTATGAGGTATTTCCTTTT
TCTTTCCGTGTAGAAGAAATCATGAACCGTTCCCAAGAGATTGCCCAGGCAGTCCATGCCAAAAGTCTTGGAACAGAGCA
TGTCCTCTTGGCGCTCTTACTAGAGCGGGGAACCTTAGCTTCTCAAGTGTTGGAGTATGTGGGCTTCCGCTATGATGATC
AGGAAGATGGCATTAAAATCGTCGAACTTCGTAAGAGTTTGGAACAACGAGCAGGTTGGGACAAGGAAGCTGTCAAGGCT
ATCCGTTCTCTCTATCGGTCCCAGCAACCAAATCGTCAAACCATGGGAAATATGATGGGCATGCCAGCCTCTACCAGCGG
TGGTTTGGAAGACTACACCCGAGATTTGACAGAAATGGCTTGCAATGGCAGTTTGGAACCGGTGATTGGTCGGGGGCAAG
AAATCTCGCGGATGATTCAGATTTTGAGCCGCAAAACGAAAAATAATCCAGTCCTCGTTGGAGATGCCGGTGTCGGAAAG
ACTGCTCTGGCTTTGGGCTTGGCCCAACGGATTGCCAGTGGAGATGTCCCAACTGAACTTGCTAAGATGCGTGTCTTAGA
GTTAGACTTGATGAATGTTGTTGCGGGAACGCGTTTCCGTGGGGATTTTGAAGAGCGGATGAACAACATCATCAATGATA
TTGAAGAAGATGGCCATGTCATTCTCTTCATTGATGAGCTCCATACCATTATGGGATCTGGATCAGGGATTGACTCCACC
TTGGATGCAGCCAATATCTTGAAGCCTGCCTTGGCTCGCGGGACCTTACGGACCGTAGGAGCGACTACGCAAGAAGAATA
CCAAAAACACATCGAAAAAGATGCCGCTCTGTCACGCCGTTTTGCCAAGGTTTTGATTGAGCAACCGTCTGTTGCGGATA
GCATTGCTATTTTGCAAGGGCTCAAGAAGACCTATGAGCGTCACCACCGTGTCCATATTACGGATGCAGCCATTGAGACA
GCCGTTGTCTATGCCCATCGTTATTTGACCAGTCGCCTCTTGCCAGACTCAGCCATTGATCTTTTGGATGAGGCGGCAGC
GACTGTACAAAACAAGGGGCCTCAAGCGGGTCTTCAGTCCGATTTGACAGCTGCCGATCAGGCCTTGCTCAAGGGACAGT
GGAAAAAAGTTGCTCAGTTACTAAAAGAAGACGCCAGTCCGAAAGGCTATCAGTTAGAAGTCAAGGAAGAGGATATTCTG
AAGACGCTCAGTCAGCTTTCTGGCATTCCTGTGGAGAAACTAACCCAAACAGCAGCTAAGAAATACCTTGAATTAGAAGC
GGAACTTCATAAGCGCGTGATCGGTCAGGATCAGGCCGTCTCAAGTATCAGCCGAGCGATTCGCCGCAATCAATCTGGAA
TCCGGTCTCACAAGCGACCAATTGGTTCCTTCCTCTTCCTCGGTCCGACAGGAGTCGGGAAAACCGAGCTAGCCAAGGCG
CTTGCTGAGGTTCTATTTGATGACGAGTCCGCTTTGATTCGCTTTGATATGAGTGAATACATGGAGAAATTTGCAGCTAG
TCGTCTCAACGGAGCTCCTCCGGGTTACGTTGGCTATGAAGAAGGCGGTGAGTTGACGGAAAAAGTCCGCAACAAACCTT
ATTCAGTCCTCTTGTTTGATGAGGTGGAAAAAGCCCATCCAGATATCTTTAACGTTCTCTTGCAAGTCTTGGATGATGGT
GTCTTGACCGACAGCAAGGGACGTAAGGTGGATTTCTCCAATACCATTATTATCATGACGTCAAACTTGGGAGCTACTGC
TTTACGAGATGATAAGACAGTTGGTTTTGGAGCCAAGGATATTCGCTTTGACCAAGCCAACATGGAAAAACGCATTTTCG
AAGAGTTGAAGAAGACCTATCGACCAGAGTTTATTAACCGGATTGATGAAAAGGTTGTCTTCCATAGCTTGACCAGTGAC
CAAATGCACGAGATTGTCAAGATTATGGTAAAACCATTGATTCAATCCCTAGCAGAGAAGGGCATTACTCTGAAATTCCA
AGCGTCTGCCCTTAAATGGCTGGCAACTCACGGATATGATCCAGAGATGGGAGCGCGTCCTTTGCGTCGGACCATCCAGA
CCCAGGTGGAAGACTACTTGGCAGAAATCCTCTTGAGAGGAGAAGTTGCAGAAGGTCAAACCCTCAAGGTAGGTGTCAAG
TCTGGTCAGCTTAACTTTACGATTGACTAG
ATGAACTATTCAAAAGCCCTATTAGAAACGATTGAAGCCGCTCAAATCTTGGCGGGTCATTTTGATTCCCAAACCCTAGA
TACCTGGCATATCCTAGTGGCCCTAGCAAATAACCCCTATAGTGTAGCTGGTTCCGTCTTAAGTGACTATCCTATGCAGA
TTGATGATTTTCAAGACGCAGCTGAGCACATCACGGGCCAAGTCTACCAACGGGATGGTCGCTATGAGGTATTTCCTTTT
TCTTTCCGTGTAGAAGAAATCATGAACCGTTCCCAAGAGATTGCCCAGGCAGTCCATGCCAAAAGTCTTGGAACAGAGCA
TGTCCTCTTGGCGCTCTTACTAGAGCGGGGAACCTTAGCTTCTCAAGTGTTGGAGTATGTGGGCTTCCGCTATGATGATC
AGGAAGATGGCATTAAAATCGTCGAACTTCGTAAGAGTTTGGAACAACGAGCAGGTTGGGACAAGGAAGCTGTCAAGGCT
ATCCGTTCTCTCTATCGGTCCCAGCAACCAAATCGTCAAACCATGGGAAATATGATGGGCATGCCAGCCTCTACCAGCGG
TGGTTTGGAAGACTACACCCGAGATTTGACAGAAATGGCTTGCAATGGCAGTTTGGAACCGGTGATTGGTCGGGGGCAAG
AAATCTCGCGGATGATTCAGATTTTGAGCCGCAAAACGAAAAATAATCCAGTCCTCGTTGGAGATGCCGGTGTCGGAAAG
ACTGCTCTGGCTTTGGGCTTGGCCCAACGGATTGCCAGTGGAGATGTCCCAACTGAACTTGCTAAGATGCGTGTCTTAGA
GTTAGACTTGATGAATGTTGTTGCGGGAACGCGTTTCCGTGGGGATTTTGAAGAGCGGATGAACAACATCATCAATGATA
TTGAAGAAGATGGCCATGTCATTCTCTTCATTGATGAGCTCCATACCATTATGGGATCTGGATCAGGGATTGACTCCACC
TTGGATGCAGCCAATATCTTGAAGCCTGCCTTGGCTCGCGGGACCTTACGGACCGTAGGAGCGACTACGCAAGAAGAATA
CCAAAAACACATCGAAAAAGATGCCGCTCTGTCACGCCGTTTTGCCAAGGTTTTGATTGAGCAACCGTCTGTTGCGGATA
GCATTGCTATTTTGCAAGGGCTCAAGAAGACCTATGAGCGTCACCACCGTGTCCATATTACGGATGCAGCCATTGAGACA
GCCGTTGTCTATGCCCATCGTTATTTGACCAGTCGCCTCTTGCCAGACTCAGCCATTGATCTTTTGGATGAGGCGGCAGC
GACTGTACAAAACAAGGGGCCTCAAGCGGGTCTTCAGTCCGATTTGACAGCTGCCGATCAGGCCTTGCTCAAGGGACAGT
GGAAAAAAGTTGCTCAGTTACTAAAAGAAGACGCCAGTCCGAAAGGCTATCAGTTAGAAGTCAAGGAAGAGGATATTCTG
AAGACGCTCAGTCAGCTTTCTGGCATTCCTGTGGAGAAACTAACCCAAACAGCAGCTAAGAAATACCTTGAATTAGAAGC
GGAACTTCATAAGCGCGTGATCGGTCAGGATCAGGCCGTCTCAAGTATCAGCCGAGCGATTCGCCGCAATCAATCTGGAA
TCCGGTCTCACAAGCGACCAATTGGTTCCTTCCTCTTCCTCGGTCCGACAGGAGTCGGGAAAACCGAGCTAGCCAAGGCG
CTTGCTGAGGTTCTATTTGATGACGAGTCCGCTTTGATTCGCTTTGATATGAGTGAATACATGGAGAAATTTGCAGCTAG
TCGTCTCAACGGAGCTCCTCCGGGTTACGTTGGCTATGAAGAAGGCGGTGAGTTGACGGAAAAAGTCCGCAACAAACCTT
ATTCAGTCCTCTTGTTTGATGAGGTGGAAAAAGCCCATCCAGATATCTTTAACGTTCTCTTGCAAGTCTTGGATGATGGT
GTCTTGACCGACAGCAAGGGACGTAAGGTGGATTTCTCCAATACCATTATTATCATGACGTCAAACTTGGGAGCTACTGC
TTTACGAGATGATAAGACAGTTGGTTTTGGAGCCAAGGATATTCGCTTTGACCAAGCCAACATGGAAAAACGCATTTTCG
AAGAGTTGAAGAAGACCTATCGACCAGAGTTTATTAACCGGATTGATGAAAAGGTTGTCTTCCATAGCTTGACCAGTGAC
CAAATGCACGAGATTGTCAAGATTATGGTAAAACCATTGATTCAATCCCTAGCAGAGAAGGGCATTACTCTGAAATTCCA
AGCGTCTGCCCTTAAATGGCTGGCAACTCACGGATATGATCCAGAGATGGGAGCGCGTCCTTTGCGTCGGACCATCCAGA
CCCAGGTGGAAGACTACTTGGCAGAAATCCTCTTGAGAGGAGAAGTTGCAGAAGGTCAAACCCTCAAGGTAGGTGTCAAG
TCTGGTCAGCTTAACTTTACGATTGACTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae Rx1 |
76.638 |
100 |
0.766 |
| clpC | Streptococcus pneumoniae D39 |
76.638 |
100 |
0.766 |
| clpC | Streptococcus pneumoniae TIGR4 |
76.638 |
100 |
0.766 |
| clpC | Streptococcus mutans UA159 |
66.422 |
100 |
0.67 |
| clpC | Streptococcus thermophilus LMG 18311 |
65.361 |
100 |
0.66 |
| clpC | Streptococcus thermophilus LMD-9 |
65.361 |
100 |
0.66 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.798 |
100 |
0.502 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.644 |
100 |
0.46 |
| clpE | Streptococcus mutans UA159 |
48.475 |
77.009 |
0.373 |
| clpE | Streptococcus pneumoniae Rx1 |
47.191 |
77.009 |
0.363 |
| clpE | Streptococcus pneumoniae D39 |
47.191 |
77.009 |
0.363 |
| clpE | Streptococcus pneumoniae R6 |
47.191 |
77.009 |
0.363 |
| clpE | Streptococcus pneumoniae TIGR4 |
47.191 |
77.009 |
0.363 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
45.568 |
79.481 |
0.362 |