Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   D7D50_RS00760 Genome accession   NZ_CP032620
Coordinates   133869..134600 (-) Length   243 a.a.
NCBI ID   WP_120701216.1    Uniprot ID   -
Organism   Streptococcus koreensis strain KCOM 2890 (=JS71)     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 128869..139600
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D7D50_RS00730 (D7D50_00730) rnpM 129042..129338 (-) 297 WP_006596879.1 RNase P modulator RnpM -
  D7D50_RS00735 (D7D50_00735) nusA 129349..130494 (-) 1146 WP_120701214.1 transcription termination factor NusA -
  D7D50_RS00740 (D7D50_00740) rimP 130540..131028 (-) 489 WP_174705361.1 ribosome maturation factor RimP -
  D7D50_RS00745 (D7D50_00745) trmB 131350..131985 (-) 636 WP_099747332.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  D7D50_RS00750 (D7D50_00750) ccrZ 131982..132776 (-) 795 WP_099747333.1 cell cycle regulator CcrZ -
  D7D50_RS00755 (D7D50_00755) - 132817..133872 (-) 1056 WP_120701215.1 ABC transporter permease -
  D7D50_RS00760 (D7D50_00760) pptA 133869..134600 (-) 732 WP_120701216.1 ABC transporter ATP-binding protein Regulator
  D7D50_RS00765 (D7D50_00765) - 134668..135081 (+) 414 WP_120701217.1 HIT family protein -
  D7D50_RS00770 (D7D50_00770) - 135095..135388 (+) 294 WP_120701218.1 hypothetical protein -
  D7D50_RS00775 (D7D50_00775) brpA 135448..136617 (-) 1170 WP_120701219.1 biofilm formation/cell division transcriptional regulator BrpA -
  D7D50_RS00780 (D7D50_00780) - 136614..137147 (-) 534 WP_023022268.1 GNAT family N-acetyltransferase -
  D7D50_RS00785 (D7D50_00785) tsaE 137150..137599 (-) 450 WP_042361452.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  D7D50_RS00790 (D7D50_00790) - 137720..139141 (-) 1422 WP_120701220.1 NCS2 family permease -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26928.27 Da        Isoelectric Point: 4.7064

>NTDB_id=317106 D7D50_RS00760 WP_120701216.1 133869..134600(-) (pptA) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
MLEIKNLTGGYVNIPVLKDVSFEVGDGQLIGLIGLNGAGKSTTINEIIGLLRPYAGEIRIDGLTLAASPSAYRQKIGYIP
ETPSLYEELTLREHIETVAMAYDLDQEAVFARVTPLLKQFRLEEKLDWFPVHFSKGMKQKVMIICAFAVDPSLFIVDEPF
LGLDPVAISDLIQLLNAEKKKGKSILMSTHVLDSAEKMCDAFVILHKGQVRAQGTLEELRTEFGMADADLNEIYLALTKE
ADR

Nucleotide


Download         Length: 732 bp        

>NTDB_id=317106 D7D50_RS00760 WP_120701216.1 133869..134600(-) (pptA) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
ATGTTAGAAATAAAAAACCTGACAGGAGGCTATGTCAATATCCCTGTCTTAAAAGATGTTAGTTTCGAGGTTGGCGATGG
CCAATTAATTGGATTGATCGGCTTGAATGGGGCAGGGAAATCAACGACCATTAATGAAATTATTGGTCTCCTGCGTCCCT
ATGCTGGTGAAATCCGGATTGACGGCTTGACTCTAGCAGCTTCTCCAAGTGCTTATCGCCAAAAAATTGGTTATATCCCA
GAAACCCCTAGCCTTTATGAAGAGTTAACCTTGCGTGAGCATATTGAGACAGTAGCTATGGCCTATGACTTGGATCAAGA
AGCTGTTTTTGCGCGTGTGACTCCTCTCTTGAAACAATTTCGACTAGAGGAAAAATTGGATTGGTTTCCTGTCCATTTTT
CTAAGGGGATGAAACAAAAGGTCATGATCATTTGTGCTTTTGCTGTGGATCCAAGTTTGTTTATTGTCGACGAGCCCTTT
TTAGGCCTAGATCCAGTCGCTATCTCAGATTTAATTCAACTATTGAATGCAGAGAAAAAGAAAGGGAAATCCATTTTAAT
GAGTACCCATGTTCTGGATTCAGCTGAAAAAATGTGTGATGCCTTTGTCATCCTCCATAAGGGACAGGTCCGTGCTCAGG
GGACTTTAGAGGAATTGCGGACAGAGTTTGGGATGGCAGATGCGGATTTGAATGAGATTTACCTTGCACTAACAAAAGAG
GCTGACCGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

76.151

98.354

0.749
  pptA Streptococcus thermophilus LMD-9

75.314

98.354

0.741

Multiple sequence alignment