Detailed information
Bioinformatically predicted
Overview
| Name | comH | Type | Machinery gene |
| Locus tag | HPG27_RS07580 | Genome accession | NC_011333 |
| Coordinates | 1570275..1571714 (-) | Length | 479 a.a. |
| NCBI ID | WP_000748975.1 | Uniprot ID | B5Z9E2 |
| Organism | Helicobacter pylori G27 | ||
| Function | import of DNA into the periplasm (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1565275..1576714
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPG27_RS07555 (HPG27_1445) | recG | 1566402..1568273 (-) | 1872 | WP_001158345.1 | ATP-dependent DNA helicase RecG | - |
| HPG27_RS07560 (HPG27_1446) | - | 1568355..1568708 (+) | 354 | WP_000836988.1 | hypothetical protein | - |
| HPG27_RS07565 (HPG27_1447) | - | 1568712..1569346 (+) | 635 | Protein_1466 | outer membrane protein | - |
| HPG27_RS07570 (HPG27_1448) | - | 1569343..1570095 (-) | 753 | WP_000767570.1 | exodeoxyribonuclease III | - |
| HPG27_RS07580 (HPG27_1449) | comH | 1570275..1571714 (-) | 1440 | WP_000748975.1 | hypothetical protein | Machinery gene |
| HPG27_RS07585 (HPG27_1450) | dnaA | 1571935..1573302 (-) | 1368 | WP_000380615.1 | chromosomal replication initiator protein DnaA | - |
| HPG27_RS07590 (HPG27_1451) | - | 1573454..1573996 (+) | 543 | WP_000923002.1 | hypothetical protein | - |
| HPG27_RS07595 (HPG27_1452) | - | 1574032..1574271 (+) | 240 | WP_000462051.1 | DUF2443 family protein | - |
| HPG27_RS07600 (HPG27_1453) | glmS | 1574272..1576065 (+) | 1794 | WP_000334439.1 | glutamine--fructose-6-phosphate transaminase (isomerizing) | - |
Sequence
Protein
Download Length: 479 a.a. Molecular weight: 54784.64 Da Isoelectric Point: 6.9523
>NTDB_id=31691 HPG27_RS07580 WP_000748975.1 1570275..1571714(-) (comH) [Helicobacter pylori G27]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKEAHAHQMPSLNAPMQKPQNKPSSSQQPPQNFSYPESKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNNTSNADSNENNENNENRDNVEKQAIRDANIKEFA
CGKWVYDDENLQAYRPSILKRVDADKQTATDITSCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKEAHAHQMPSLNAPMQKPQNKPSSSQQPPQNFSYPESKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNNTSNADSNENNENNENRDNVEKQAIRDANIKEFA
CGKWVYDDENLQAYRPSILKRVDADKQTATDITSCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV
Nucleotide
Download Length: 1440 bp
>NTDB_id=31691 HPG27_RS07580 WP_000748975.1 1570275..1571714(-) (comH) [Helicobacter pylori G27]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCCCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACCGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAATACCCAAATCGTTTTTTCTTCAAAAGA
ACTGAAAGAAGCACACGCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAGCCTAGTTCATCGC
AACAACCTCCTCAAAACTTTTCTTATCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAGCCCCACTAACGAAACTCAAACGCCAACAAACGACACCAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACCGAAAAAACGCTCCCTAACAACACCTCTAACGCTGATAGTA
ATGAAAACAATGAAAATAACGAAAATAGGGATAATGTGGAAAAACAAGCCATTAGAGATGCTAATATTAAAGAATTTGCG
TGCGGGAAGTGGGTTTATGACGATGAAAACTTGCAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGCAGACAAACA
GACTGCGACAGATATTACCTCTTGCGATTACAGCACCGCTGAAAATAAAAGTGGTAAAATCATTACCCCTTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACGATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTAATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTCTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTACGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCCCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACCGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAATACCCAAATCGTTTTTTCTTCAAAAGA
ACTGAAAGAAGCACACGCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAGCCTAGTTCATCGC
AACAACCTCCTCAAAACTTTTCTTATCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAGCCCCACTAACGAAACTCAAACGCCAACAAACGACACCAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACCGAAAAAACGCTCCCTAACAACACCTCTAACGCTGATAGTA
ATGAAAACAATGAAAATAACGAAAATAGGGATAATGTGGAAAAACAAGCCATTAGAGATGCTAATATTAAAGAATTTGCG
TGCGGGAAGTGGGTTTATGACGATGAAAACTTGCAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGCAGACAAACA
GACTGCGACAGATATTACCTCTTGCGATTACAGCACCGCTGAAAATAAAAGTGGTAAAATCATTACCCCTTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACGATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTAATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTCTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTACGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comH | Helicobacter pylori 26695 |
96.66 |
100 |
0.967 |