Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   D6022_RS16860 Genome accession   NZ_CP032538
Coordinates   3160003..3160479 (-) Length   158 a.a.
NCBI ID   WP_003182174.1    Uniprot ID   A0A1Y0YPP5
Organism   Bacillus licheniformis strain MT-B06     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3155003..3165479
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D6022_RS16825 - 3155128..3155562 (-) 435 WP_003182188.1 hypothetical protein -
  D6022_RS16830 - 3155776..3156102 (+) 327 WP_206696990.1 YxeA family protein -
  D6022_RS16835 speG 3156140..3156682 (-) 543 WP_003182184.1 spermidine N1-acetyltransferase -
  D6022_RS16840 - 3156711..3157028 (-) 318 WP_011198005.1 multidrug efflux SMR transporter -
  D6022_RS16845 - 3157028..3157363 (-) 336 WP_011198004.1 multidrug efflux SMR transporter -
  D6022_RS16850 - 3157445..3158028 (-) 584 Protein_3306 TetR family transcriptional regulator -
  D6022_RS16855 - 3158742..3159362 (+) 621 WP_003182178.1 hypothetical protein -
  D6022_RS24015 - 3159711..3159884 (-) 174 WP_003182176.1 hypothetical protein -
  D6022_RS16860 rok 3160003..3160479 (-) 477 WP_003182174.1 hypothetical protein Regulator
  D6022_RS16865 - 3160640..3161215 (-) 576 WP_003182172.1 GNAT family N-acetyltransferase -
  D6022_RS16870 - 3161249..3161647 (-) 399 WP_225852963.1 DUF4944 domain-containing protein -
  D6022_RS16875 - 3161834..3162430 (-) 597 WP_003182167.1 cyclopropane-fatty-acyl-phospholipid synthase family protein -
  D6022_RS16880 - 3162572..3162976 (-) 405 WP_223307095.1 hypothetical protein -
  D6022_RS16885 - 3163104..3163346 (-) 243 WP_003182164.1 hypothetical protein -
  D6022_RS16890 - 3163409..3164386 (-) 978 WP_003182162.1 alpha/beta hydrolase -
  D6022_RS16895 - 3164620..3164922 (-) 303 WP_003182160.1 hypothetical protein -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 18302.15 Da        Isoelectric Point: 10.1366

>NTDB_id=316851 D6022_RS16860 WP_003182174.1 3160003..3160479(-) (rok) [Bacillus licheniformis strain MT-B06]
MFNEREALRLRLEQLGDAEIQVMRELRKEREGIYSKLRELDRESEPAINKKSSLIDLASAAAEELKQSQHAADKHPPIKT
PSHTIFQSKTTIQREAAINILSRYEEGLKGIKLKTEIEKETGFPIKNMTTFMKSLMKHRPDIKKPARGHYILHKEKDL

Nucleotide


Download         Length: 477 bp        

>NTDB_id=316851 D6022_RS16860 WP_003182174.1 3160003..3160479(-) (rok) [Bacillus licheniformis strain MT-B06]
ATGTTCAACGAAAGAGAAGCGTTGCGTTTGAGACTTGAACAGCTAGGTGATGCGGAGATCCAGGTGATGCGGGAATTGCG
AAAAGAACGAGAGGGCATTTATTCGAAGCTGCGTGAATTGGATCGGGAGAGTGAGCCTGCAATTAACAAAAAATCTTCAT
TAATCGACTTGGCAAGCGCTGCAGCAGAGGAATTAAAACAATCCCAGCATGCCGCTGACAAACATCCGCCTATCAAGACC
CCATCTCATACTATTTTCCAATCAAAAACAACCATACAGCGTGAGGCTGCCATAAACATTTTAAGCCGCTATGAAGAGGG
CTTGAAAGGCATTAAGCTCAAAACTGAAATCGAGAAAGAAACCGGCTTTCCGATTAAAAACATGACGACATTTATGAAGA
GCTTAATGAAACATCGCCCAGATATTAAAAAGCCTGCCCGCGGCCATTATATTTTGCATAAAGAAAAAGACCTTTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Y0YPP5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

45.055

100

0.519

Multiple sequence alignment