Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | D6022_RS12690 | Genome accession | NZ_CP032538 |
| Coordinates | 2420893..2421927 (+) | Length | 344 a.a. |
| NCBI ID | WP_011198115.1 | Uniprot ID | - |
| Organism | Bacillus licheniformis strain MT-B06 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2415893..2426927
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D6022_RS12650 | - | 2416390..2416704 (+) | 315 | WP_003183487.1 | MTH1187 family thiamine-binding protein | - |
| D6022_RS12655 | - | 2416765..2416938 (-) | 174 | WP_003183486.1 | DUF2759 domain-containing protein | - |
| D6022_RS12660 | - | 2417094..2417732 (+) | 639 | WP_003183485.1 | MBL fold metallo-hydrolase | - |
| D6022_RS12665 | - | 2417770..2418015 (-) | 246 | WP_003183483.1 | DUF2626 domain-containing protein | - |
| D6022_RS12670 | - | 2418224..2418601 (+) | 378 | WP_003183482.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| D6022_RS12680 | - | 2418843..2419682 (+) | 840 | WP_003183480.1 | STAS domain-containing protein | - |
| D6022_RS12685 | comGA | 2419839..2420903 (+) | 1065 | WP_003183477.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| D6022_RS12690 | comGB | 2420893..2421927 (+) | 1035 | WP_011198115.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| D6022_RS12695 | comGC | 2421941..2422234 (+) | 294 | WP_003183466.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| D6022_RS12700 | comGD | 2422240..2422677 (+) | 438 | WP_009327905.1 | competence type IV pilus minor pilin ComGD | - |
| D6022_RS12705 | comGE | 2422661..2423008 (+) | 348 | WP_009327907.1 | competence type IV pilus minor pilin ComGE | - |
| D6022_RS12710 | comGF | 2423034..2423405 (+) | 372 | WP_003183461.1 | competence type IV pilus minor pilin ComGF | - |
| D6022_RS12715 | comGG | 2423418..2423783 (+) | 366 | WP_003183459.1 | competence type IV pilus minor pilin ComGG | - |
| D6022_RS12720 | - | 2423872..2424054 (+) | 183 | WP_003183456.1 | YqzE family protein | - |
| D6022_RS12725 | - | 2424078..2424398 (-) | 321 | WP_003183454.1 | YqzG/YhdC family protein | - |
| D6022_RS12730 | tapA | 2424675..2425403 (+) | 729 | WP_003183451.1 | amyloid fiber anchoring/assembly protein TapA | - |
| D6022_RS12735 | sipW | 2425400..2425984 (+) | 585 | WP_003183449.1 | signal peptidase I SipW | - |
| D6022_RS12740 | tasA | 2426058..2426852 (+) | 795 | WP_003183447.1 | biofilm matrix protein TasA | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 39737.95 Da Isoelectric Point: 9.3543
>NTDB_id=316842 D6022_RS12690 WP_011198115.1 2420893..2421927(+) (comGB) [Bacillus licheniformis strain MT-B06]
MKIKMKWPVREQADLLKKLGDMMQSGYTILDALSMLKLQLNERRRADLTFAMEKLTEGCPVFQVLEMISFHKDAVTIVYF
AEQHGNLPFAFRQSGELLHRKIAQSEKLKKAARYPLFLVLTVCVIISIMKSAIVPQFSAIYESMNVETSFATTLIFYVFD
HFYLFFAGLPLVAAALSLYYLCSFRHKPPEDKMAFLITIPLLGQTFKLFNSYFLSLQLSNLLQAGLSVYDSLKAFESQPF
LRFHKNEAKRLIERLKQGESLEQMLAGHPFYENDLAKAVAHGQLNGHLYRELYSYSQFLIERLERKAEKWTGLIQPLIYG
LTAAMILILYLSMLLPMYQMMNQL
MKIKMKWPVREQADLLKKLGDMMQSGYTILDALSMLKLQLNERRRADLTFAMEKLTEGCPVFQVLEMISFHKDAVTIVYF
AEQHGNLPFAFRQSGELLHRKIAQSEKLKKAARYPLFLVLTVCVIISIMKSAIVPQFSAIYESMNVETSFATTLIFYVFD
HFYLFFAGLPLVAAALSLYYLCSFRHKPPEDKMAFLITIPLLGQTFKLFNSYFLSLQLSNLLQAGLSVYDSLKAFESQPF
LRFHKNEAKRLIERLKQGESLEQMLAGHPFYENDLAKAVAHGQLNGHLYRELYSYSQFLIERLERKAEKWTGLIQPLIYG
LTAAMILILYLSMLLPMYQMMNQL
Nucleotide
Download Length: 1035 bp
>NTDB_id=316842 D6022_RS12690 WP_011198115.1 2420893..2421927(+) (comGB) [Bacillus licheniformis strain MT-B06]
ATGAAGATTAAAATGAAGTGGCCTGTCCGGGAACAGGCGGACCTTCTGAAAAAACTAGGAGACATGATGCAGAGTGGCTA
TACGATTTTGGATGCTTTAAGTATGCTGAAATTGCAATTGAATGAAAGACGAAGAGCGGATCTGACATTTGCGATGGAGA
AGCTGACAGAAGGGTGTCCTGTGTTTCAAGTTCTTGAAATGATTTCCTTTCACAAGGATGCTGTCACCATTGTTTACTTT
GCCGAACAGCACGGGAATTTGCCATTTGCCTTTAGGCAGAGCGGAGAGCTGCTTCACCGCAAGATCGCTCAAAGCGAAAA
ATTAAAGAAAGCCGCCAGATACCCCTTGTTTTTAGTTTTAACGGTCTGCGTCATCATCTCTATTATGAAATCAGCAATAG
TTCCGCAATTTTCCGCCATCTATGAATCGATGAACGTTGAAACGTCTTTTGCAACGACTCTCATCTTTTATGTTTTCGAT
CACTTTTATCTTTTTTTCGCGGGACTGCCGCTGGTTGCCGCAGCTCTATCCCTCTATTATCTGTGTTCATTCCGCCATAA
ACCTCCAGAAGACAAAATGGCCTTTCTCATTACAATTCCCTTGCTGGGCCAAACCTTCAAACTATTCAACAGCTATTTTT
TATCGCTCCAGCTGAGCAATCTTTTGCAAGCGGGTCTGTCTGTATATGACAGTTTAAAAGCATTTGAAAGCCAGCCGTTT
TTACGATTTCATAAAAATGAAGCGAAGCGCTTGATCGAGCGGCTGAAACAGGGGGAGAGTCTGGAGCAGATGCTGGCCGG
ACATCCGTTTTATGAAAATGATTTAGCAAAGGCTGTTGCACACGGCCAACTAAATGGGCACTTATACAGAGAGCTGTATT
CATATAGTCAGTTTTTGATTGAGCGGCTTGAAAGAAAGGCCGAAAAATGGACAGGCCTGATCCAGCCATTGATTTACGGG
CTAACCGCGGCGATGATATTAATTCTTTATTTGTCCATGCTTTTGCCAATGTATCAAATGATGAACCAGCTATAA
ATGAAGATTAAAATGAAGTGGCCTGTCCGGGAACAGGCGGACCTTCTGAAAAAACTAGGAGACATGATGCAGAGTGGCTA
TACGATTTTGGATGCTTTAAGTATGCTGAAATTGCAATTGAATGAAAGACGAAGAGCGGATCTGACATTTGCGATGGAGA
AGCTGACAGAAGGGTGTCCTGTGTTTCAAGTTCTTGAAATGATTTCCTTTCACAAGGATGCTGTCACCATTGTTTACTTT
GCCGAACAGCACGGGAATTTGCCATTTGCCTTTAGGCAGAGCGGAGAGCTGCTTCACCGCAAGATCGCTCAAAGCGAAAA
ATTAAAGAAAGCCGCCAGATACCCCTTGTTTTTAGTTTTAACGGTCTGCGTCATCATCTCTATTATGAAATCAGCAATAG
TTCCGCAATTTTCCGCCATCTATGAATCGATGAACGTTGAAACGTCTTTTGCAACGACTCTCATCTTTTATGTTTTCGAT
CACTTTTATCTTTTTTTCGCGGGACTGCCGCTGGTTGCCGCAGCTCTATCCCTCTATTATCTGTGTTCATTCCGCCATAA
ACCTCCAGAAGACAAAATGGCCTTTCTCATTACAATTCCCTTGCTGGGCCAAACCTTCAAACTATTCAACAGCTATTTTT
TATCGCTCCAGCTGAGCAATCTTTTGCAAGCGGGTCTGTCTGTATATGACAGTTTAAAAGCATTTGAAAGCCAGCCGTTT
TTACGATTTCATAAAAATGAAGCGAAGCGCTTGATCGAGCGGCTGAAACAGGGGGAGAGTCTGGAGCAGATGCTGGCCGG
ACATCCGTTTTATGAAAATGATTTAGCAAAGGCTGTTGCACACGGCCAACTAAATGGGCACTTATACAGAGAGCTGTATT
CATATAGTCAGTTTTTGATTGAGCGGCTTGAAAGAAAGGCCGAAAAATGGACAGGCCTGATCCAGCCATTGATTTACGGG
CTAACCGCGGCGATGATATTAATTCTTTATTTGTCCATGCTTTTGCCAATGTATCAAATGATGAACCAGCTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
56.656 |
93.895 |
0.532 |