Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   OEA_RS23220 Genome accession   NZ_CP032527
Coordinates   4515016..4515210 (-) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia megaterium NCT-2     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4510016..4520210
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OEA_RS23195 (OEA_24715) - 4510182..4511204 (-) 1023 WP_016763041.1 ABC transporter ATP-binding protein -
  OEA_RS23200 (OEA_24720) - 4511431..4512204 (-) 774 WP_016763040.1 DUF2268 domain-containing protein -
  OEA_RS23205 (OEA_24725) fabF 4512311..4513552 (-) 1242 WP_013055405.1 beta-ketoacyl-ACP synthase II -
  OEA_RS23210 (OEA_24730) - 4513592..4514530 (-) 939 WP_016763039.1 beta-ketoacyl-ACP synthase III -
  OEA_RS23215 (OEA_24735) - 4514787..4514987 (+) 201 WP_016763038.1 hypothetical protein -
  OEA_RS23220 (OEA_24740) comZ 4515016..4515210 (-) 195 WP_013081746.1 ComZ family protein Regulator
  OEA_RS23225 (OEA_24745) - 4515288..4516172 (-) 885 WP_016763037.1 NAD(P)-dependent oxidoreductase -
  OEA_RS23230 (OEA_24750) - 4516354..4517094 (-) 741 WP_013081744.1 hypothetical protein -
  OEA_RS23235 (OEA_24755) - 4517305..4517493 (+) 189 WP_013055400.1 YjzD family protein -
  OEA_RS23240 (OEA_24760) - 4517696..4518580 (+) 885 WP_016763035.1 NAD(P)-dependent oxidoreductase -
  OEA_RS23245 (OEA_24765) galT 4518623..4520146 (-) 1524 WP_016763034.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=316792 OEA_RS23220 WP_013081746.1 4515016..4515210(-) (comZ) [Priestia megaterium NCT-2]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=316792 OEA_RS23220 WP_013081746.1 4515016..4515210(-) (comZ) [Priestia megaterium NCT-2]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAACAGATCTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACACGTACAGCCGGTATTGACATTACTAACAAAAGTAATGAACGATGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563

Multiple sequence alignment