Detailed information NTG0316489

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: LLWM1_RS11830
• Genome accession: NZ_CP032500
• Coordinates: 2299569..2300597 (-)
• Length: 342 a.a.
• NCBI ID: WP_058221367.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain WM1
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 2294569..2305597

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLWM1_RS11800 (LLWM1_03225)	-	2294856..2295353 (-)	498	WP_003132662.1	nitroreductase family protein	-
LLWM1_RS11805 (LLWM1_2256)	-	2295340..2295549 (-)	210	WP_003132661.1	hypothetical protein	-
LLWM1_RS11810 (LLWM1_2257)	-	2295546..2296373 (-)	828	WP_058221368.1	radical SAM protein	-
LLWM1_RS11815 (LLWM1_03230)	-	2296366..2297565 (-)	1200	WP_228763251.1	hypothetical protein	-
LLWM1_RS11820 (LLWM1_03235)	-	2297562..2298488 (-)	927	WP_228763250.1	radical SAM protein	-
LLWM1_RS11825 (LLWM1_2259)	-	2298591..2299448 (-)	858	WP_003132658.1	Rgg/GadR/MutR family transcriptional regulator	-
LLWM1_RS11830 (LLWM1_2260)	sepM	2299569..2300597 (-)	1029	WP_058221367.1	SepM family pheromone-processing serine protease	Regulator
LLWM1_RS11835 (LLWM1_2261)	coaD	2300584..2301081 (-)	498	WP_058221366.1	pantetheine-phosphate adenylyltransferase	-
LLWM1_RS11840 (LLWM1_2262)	rsmD	2301129..2301668 (-)	540	WP_003132655.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LLWM1_RS11845 (LLWM1_2263)	-	2301839..2303059 (-)	1221	WP_003132654.1	MFS transporter	-
LLWM1_RS11850 (LLWM1_2264)	lmrP	2303143..2304368 (-)	1226	Protein_2304	multidrug efflux MFS transporter LmrP	-
LLWM1_RS11855 (LLWM1_2265)	-	2304556..2305050 (+)	495	WP_012898649.1	RNA polymerase sigma factor	-

Sequence

Protein

• Length: 342 a.a.
• Molecular weight: 37379.98 Da
• Isoelectric Point: 9.9183

>NTDB_id=316489 LLWM1_RS11830 WP_058221367.1 2299569..2300597(-) (sepM) [Lactococcus lactis subsp. lactis strain WM1]
MKKNKKINPKLKWGISIGLIVVALLALFYPTSYYVEMPGTTEPLGKMVKVEGKKDEHKGDFFLTTVQIARANLATMIYSH
FNSFTSIYSEQEMTGGLNDAQFNRVNQFYMETAQNTAIYQAFKLANKPYELKYEGVYVLDIAKNSTFKNKLELADTITAV
NGQQFTSSADMIAYVSKQKVGDSVTIEYTRIDGTKHKSTGKYIKIANGKTGIGISLVDHTEVVTTPKVTVNAGSISGPSA
GMMFTLEIYSQLTGKDLRNGREIAGTGTIEHDGSIGQIGGVDKKVATASKEGAKVFLVPDSGTKKESSNNYLGAKAAAKK
LKTKMKIVPVKTIQDALDYLEK

Nucleotide

• Length: 1029 bp

>NTDB_id=316489 LLWM1_RS11830 WP_058221367.1 2299569..2300597(-) (sepM) [Lactococcus lactis subsp. lactis strain WM1]
ATGAAAAAAAATAAAAAAATTAATCCCAAATTAAAATGGGGAATCTCGATTGGTCTAATTGTTGTTGCCCTTTTAGCTTT
ATTTTATCCAACAAGTTACTATGTGGAAATGCCCGGAACAACCGAGCCTTTAGGAAAAATGGTCAAAGTTGAAGGCAAAA
AAGATGAACATAAAGGTGATTTTTTCCTGACGACTGTCCAAATTGCACGAGCAAATCTTGCTACAATGATTTACAGCCAT
TTTAATAGTTTTACAAGCATTTACAGTGAGCAAGAAATGACTGGTGGACTTAACGACGCACAGTTCAACCGTGTCAACCA
GTTTTACATGGAAACGGCACAGAATACAGCGATTTATCAAGCTTTTAAATTAGCTAATAAACCTTATGAACTTAAATATG
AAGGCGTTTATGTCCTTGATATTGCCAAAAATTCGACCTTTAAAAATAAGCTAGAACTTGCAGATACGATTACAGCAGTC
AATGGTCAACAGTTTACATCAAGTGCCGACATGATTGCTTATGTTTCCAAACAAAAAGTCGGTGATTCAGTAACGATTGA
ATACACGAGAATTGACGGCACAAAGCACAAGTCAACTGGCAAATACATCAAAATTGCTAATGGAAAAACAGGAATTGGGA
TCAGCCTAGTTGACCATACTGAAGTCGTGACGACTCCAAAAGTTACTGTCAACGCGGGTTCAATCAGTGGTCCCTCTGCG
GGGATGATGTTTACACTAGAAATTTACAGTCAGTTGACAGGAAAAGATTTGCGAAACGGGCGCGAAATTGCTGGAACTGG
GACGATTGAACATGACGGAAGCATTGGCCAAATCGGCGGTGTTGATAAAAAAGTAGCCACAGCGAGCAAAGAAGGGGCAA
AGGTCTTCTTGGTGCCTGACTCAGGCACCAAAAAAGAAAGTAGCAACAATTACCTTGGAGCCAAAGCCGCCGCTAAAAAA
CTAAAAACGAAGATGAAAATCGTTCCCGTCAAAACTATTCAGGACGCTTTAGATTATTTAGAAAAATAA

Domains

Predicted by InterproScan.

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (203-338)

• PDZ domain (PDZ_2) (134-194)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	48.406	100	0.488