Detailed information NTG0316294

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: D4I21_RS06755
• Genome accession: NZ_CP032479
• Coordinates: 1365309..1366622 (-)
• Length: 437 a.a.
• NCBI ID: WP_201738237.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 21-F-EK1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1360309..1371622

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4I21_RS06725	nadC	1360778..1361599 (-)	822	WP_139543409.1	carboxylating nicotinate-nucleotide diphosphorylase	-
D4I21_RS06730	nadA	1361599..1362603 (-)	1005	WP_139543410.1	quinolinate synthase NadA	-
D4I21_RS06735	-	1362593..1363396 (-)	804	WP_139543411.1	phosphatidylserine decarboxylase	-
D4I21_RS06740	-	1363390..1363896 (-)	507	WP_139543412.1	helix-turn-helix domain-containing protein	-
D4I21_RS06745	-	1363909..1364403 (-)	495	WP_201737882.1	hypothetical protein	-
D4I21_RS06750	mqnP	1364396..1365238 (-)	843	WP_236635043.1	menaquinone biosynthesis prenyltransferase MqnP	-
D4I21_RS06755	comEC/comE3	1365309..1366622 (-)	1314	WP_201738237.1	ComEC/Rec2 family competence protein	Machinery gene
D4I21_RS06760	-	1366619..1368085 (-)	1467	WP_000349729.1	replicative DNA helicase	-
D4I21_RS06765	-	1368096..1369490 (-)	1395	WP_139543415.1	NAD(P)H-hydrate dehydratase	-
D4I21_RS06770	crdS	1369493..1370695 (-)	1203	WP_139543416.1	copper-sensing histidine kinase CrdS	-
D4I21_RS06775	crdR	1370661..1371302 (-)	642	WP_139543417.1	copper response regulator transcription factor CrdR	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50247.20 Da
• Isoelectric Point: 9.9599

>NTDB_id=316294 D4I21_RS06755 WP_201738237.1 1365309..1366622(-) (comEC/comE3) [Helicobacter pylori strain 21-F-EK1]
MKDKTFQGAFELLSTPKEYLWCGVVLSLLLAINLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAQFFGKIKSCSFLESLKSCFFQTYSFSLTRKHNFKSHWRHFIDSAHSNALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKTSSFLRRSFQVISLS
VLVFLNMLIIAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLLLHAVGLGSLLDHLLNMPLIIPTISVSSPLWLLGVHLFLT
ILSARSFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=316294 D4I21_RS06755 WP_201738237.1 1365309..1366622(-) (comEC/comE3) [Helicobacter pylori strain 21-F-EK1]
TTGAAAGACAAAACCTTTCAGGGGGCGTTTGAACTTCTTTCAACCCCCAAAGAATACTTATGGTGTGGGGTTGTTTTAAG
CCTTTTGTTGGCAATCAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAAGCCTGAACG
CTCAAATCTTGTTACAATACCCTAAAACGAAAGATCAAAAAACCTATTTTGTCTTAAAGCTCCAATCAAAGGGCATGATC
TTTTATACCACTATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCACAATTTTTTGGTAAGATCAAATCTTGTTC
GTTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACACGAAAACACAATTTTAAATCGCATT
GGCGCCATTTCATTGACAGCGCTCATTCCAACGCTTTGGTGGGTAATTTGTATCGCGCGTTATTTATAGGGGATAGCTTG
AATAAAGACTTAAGAGATAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTTCATTTAGGGATTTT
GAGCGCGAGCGTGTATTTTCTTTTTTCGCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTACAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTGGGGTATTTATTGCTATTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTGTGTGGGGTGTGGTATATCT
TTTTGTTTTTAAAACACACTCAAATTTTTTTTAAAACCTCTTCTTTTTTAAGGCGATCTTTTCAAGTCATAAGCTTAAGC
GTGCTGGTGTTTTTAAACATGCTCATTATTGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTACTCTTGCATGCGGTGGGTTTGGGGTCTTTATTGGATCACC
TTTTAAACATGCCTTTAATAATCCCTACGATTTCGGTTTCTTCACCCTTATGGCTTTTAGGGGTGCATTTATTTTTAACG
ATTTTAAGCGCGCGTTCTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-392)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	95.195	100	0.952