Detailed information NTG0316274

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: D4J00_RS06735
• Genome accession: NZ_CP032478
• Coordinates: 1367605..1368918 (-)
• Length: 437 a.a.
• NCBI ID: WP_201736747.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 25-A-EK9
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1362605..1373918

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4J00_RS06700	-	1362909..1363043 (-)	135	WP_120814840.1	DNA methyltransferase	-
D4J00_RS06705	nadC	1363068..1363889 (-)	822	WP_139519805.1	carboxylating nicotinate-nucleotide diphosphorylase	-
D4J00_RS06710	nadA	1363889..1364899 (-)	1011	WP_139519807.1	quinolinate synthase NadA	-
D4J00_RS06715	-	1364889..1365692 (-)	804	WP_139519808.1	phosphatidylserine decarboxylase	-
D4J00_RS06720	-	1365686..1366192 (-)	507	WP_000953098.1	hypothetical protein	-
D4J00_RS06725	-	1366205..1366699 (-)	495	WP_201737213.1	hypothetical protein	-
D4J00_RS06730	mqnP	1366692..1367534 (-)	843	WP_236634801.1	menaquinone biosynthesis prenyltransferase MqnP	-
D4J00_RS06735	comEC/comE3	1367605..1368918 (-)	1314	WP_201736747.1	ComEC/Rec2 family competence protein	Machinery gene
D4J00_RS06740	-	1368915..1370381 (-)	1467	WP_097686770.1	replicative DNA helicase	-
D4J00_RS06745	-	1370392..1371786 (-)	1395	WP_139519815.1	NAD(P)H-hydrate dehydratase	-
D4J00_RS06750	crdS	1371789..1372991 (-)	1203	WP_139519817.1	copper-sensing histidine kinase CrdS	-
D4J00_RS06755	crdR	1372957..1373598 (-)	642	WP_139519819.1	copper response regulator transcription factor CrdR	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50272.25 Da
• Isoelectric Point: 9.9068

>NTDB_id=316274 D4J00_RS06735 WP_201736747.1 1367605..1368918(-) (comEC/comE3) [Helicobacter pylori strain 25-A-EK9]
MKDKTFQGAFELLTTPKEYLWCGVVLSLLLAINLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHVRHFIDSAHSNALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRILSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKNSSFLRRSFQAIALS
VLVFLNMLIIVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDHFLSMPLTIPTISVPSPLWLLGVHLFLT
ILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=316274 D4J00_RS06735 WP_201736747.1 1367605..1368918(-) (comEC/comE3) [Helicobacter pylori strain 25-A-EK9]
TTGAAAGACAAAACTTTTCAGGGGGCGTTTGAACTTCTTACAACCCCCAAAGAATACTTATGGTGTGGGGTTGTTTTAAG
CCTTTTGTTGGCAATCAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACGAGCCTGAACG
CTCAAATCTTGTTGCAATACCCTAAAACGAAAGATCAAAAAACCTATTTTGTCTTAAAACTCCAATCAAAGGGCATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCGCAATTTTTTGGCAAGATCAAGCCTTGCTC
ATTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACGCGAAAACAAGATTTCAAATCGCATG
TGCGCCATTTTATTGATAGCGCTCATTCCAACGCTTTAGTGGGTAATTTGTATCGCGCGTTATTTATAGGGGATAGCTTG
AATAAGGATTTAAGAGACAGGGCTAATGCGCTAGGGATCAACCACTTACTAGCCATCAGCGGGTTCCATTTAGGGATTTT
AAGCGCGAGCGTGTATTTTCTTTTTTCGCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTACAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTGGGGTATTTATTGCTATTAGATTTTTTACCCTCTTTTTTTAGGGCG
TTTTTAATGGGCTTACTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGATTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGTGTGGGGTTTTTGCTTTCTGTGTGTGGGGTGTGGTATATCT
TTTTATTCTTAAAACACACTCAAATTTTTTTTAAAAATTCTTCTTTTTTAAGGCGATCGTTTCAAGCGATCGCATTAAGC
GTGTTAGTGTTTTTGAACATGCTCATTATCGTGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATGCGGTGGGTTTAGGGTCTTTATTGGATCATT
TCTTAAGCATGCCTTTAACAATCCCTACGATTTCGGTTCCTTCGCCTTTATGGCTTTTAGGGGTGCATTTATTTTTAACG
ATTTTAAGCGCGCGATTTTTTAAAGTTTATTTAAGCATGAATGTTTTGAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-385)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	96.568	100	0.966