Detailed information NTG0316226

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: D4K70_RS02025
• Genome accession: NZ_CP032476
• Coordinates: 417732..419045 (+)
• Length: 437 a.a.
• NCBI ID: WP_201736670.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 381-C-EK1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 412732..424045

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4K70_RS02005	crdR	413052..413693 (+)	642	WP_139531835.1	copper response regulator transcription factor CrdR	-
D4K70_RS02010	crdS	413659..414861 (+)	1203	WP_139546165.1	copper-sensing histidine kinase CrdS	-
D4K70_RS02015	-	414864..416258 (+)	1395	WP_139531837.1	NAD(P)H-hydrate dehydratase	-
D4K70_RS02020	-	416269..417735 (+)	1467	WP_139531838.1	replicative DNA helicase	-
D4K70_RS02025	comEC/comE3	417732..419045 (+)	1314	WP_201736670.1	ComEC/Rec2 family competence protein	Machinery gene
D4K70_RS02030	mqnP	419116..419958 (+)	843	WP_236633289.1	menaquinone biosynthesis prenyltransferase MqnP	-
D4K70_RS02035	-	419951..420445 (+)	495	WP_201736671.1	hypothetical protein	-
D4K70_RS02040	-	420458..420964 (+)	507	WP_000953110.1	hypothetical protein	-
D4K70_RS02045	-	420958..421761 (+)	804	WP_139531841.1	phosphatidylserine decarboxylase	-
D4K70_RS02050	nadA	421751..422761 (+)	1011	WP_139531842.1	quinolinate synthase NadA	-
D4K70_RS02055	nadC	422761..423582 (+)	822	WP_139531843.1	carboxylating nicotinate-nucleotide diphosphorylase	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 49991.79 Da
• Isoelectric Point: 9.8784

>NTDB_id=316226 D4K70_RS02025 WP_201736670.1 417732..419045(+) (comEC/comE3) [Helicobacter pylori strain 381-C-EK1]
MKDKTFQGAFELLTTPKEYLWCGVILSLLLAINLYLEYLNHQKLDFSKPTSLSAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAQFFGKIKPCSFLESLRSCFFQTYSFSLTRKQDFKSHWRHFIDSAHSSALAGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSVSVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLARSLQAISLS
ALVFLNMLIIAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDNILSMPLTIPTISVPSPLWLLGAHLFLT
ILSARSFKVYLSMNVLSTGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=316226 D4K70_RS02025 WP_201736670.1 417732..419045(+) (comEC/comE3) [Helicobacter pylori strain 381-C-EK1]
TTGAAAGACAAAACTTTTCAGGGGGCGTTTGAACTTCTTACAACCCCCAAAGAATACTTATGGTGTGGGGTTATTTTAAG
CCTTTTGTTGGCAATCAATCTTTATTTAGAATACTTGAATCACCAAAAGCTTGATTTTTCAAAACCTACAAGTTTGAGCG
CTCAAATCTTGTTGCAATACCCCAAAACTAAAGATCAAAAAACCTATTTTGTCTTAAAACTCCAATCTAAGGGCATGATC
TTTTACACCACTATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCGCAATTTTTTGGCAAAATCAAACCCTGCTC
GTTTTTGGAGTCTTTAAGATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACACGAAAACAGGATTTCAAATCGCATT
GGCGCCATTTTATTGATAGCGCTCATTCAAGCGCTTTAGCGGGTAATTTGTATCGCGCGTTATTTATAGGGGATAGCTTG
AATAAAGATTTAAGAGATAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGATTCCATTTAGGGATTTT
GAGCGTTAGCGTGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTGTTGCTATTGGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTCTTAAAACACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTTGGCGCGATCTCTTCAAGCTATAAGCTTAAGC
GCACTGGTGTTTTTGAACATGCTCATTATCGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATGCGGTGGGTTTAGGGTCTTTATTGGATAATA
TTCTAAGCATGCCTTTAACAATCCCTACGATTTCGGTTCCTTCGCCCTTATGGCTTTTGGGGGCGCATTTATTTTTAACG
ATTTTAAGTGCGCGTTCTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGCACGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-375)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	95.881	100	0.959