Detailed information NTG0316205

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: D4K88_RS00860
• Genome accession: NZ_CP032475
• Coordinates: 179392..180705 (+)
• Length: 437 a.a.
• NCBI ID: WP_201736670.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 381-F-EK9
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 174392..185705

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4K88_RS00840	crdR	174712..175353 (+)	642	WP_139531835.1	copper response regulator transcription factor CrdR	-
D4K88_RS00845	crdS	175319..176521 (+)	1203	WP_139531836.1	copper-sensing histidine kinase CrdS	-
D4K88_RS00850	-	176524..177918 (+)	1395	WP_139531837.1	NAD(P)H-hydrate dehydratase	-
D4K88_RS00855	-	177929..179395 (+)	1467	WP_139531838.1	replicative DNA helicase	-
D4K88_RS00860	comEC/comE3	179392..180705 (+)	1314	WP_201736670.1	ComEC/Rec2 family competence protein	Machinery gene
D4K88_RS00865	mqnP	180776..181618 (+)	843	WP_236633289.1	menaquinone biosynthesis prenyltransferase MqnP	-
D4K88_RS00870	-	181611..182105 (+)	495	WP_201736671.1	hypothetical protein	-
D4K88_RS00875	-	182118..182624 (+)	507	WP_000953110.1	hypothetical protein	-
D4K88_RS00880	-	182618..183421 (+)	804	WP_139531841.1	phosphatidylserine decarboxylase	-
D4K88_RS00885	nadA	183411..184421 (+)	1011	WP_139531842.1	quinolinate synthase NadA	-
D4K88_RS00890	nadC	184421..185242 (+)	822	WP_139531843.1	carboxylating nicotinate-nucleotide diphosphorylase	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 49991.79 Da
• Isoelectric Point: 9.8784

>NTDB_id=316205 D4K88_RS00860 WP_201736670.1 179392..180705(+) (comEC/comE3) [Helicobacter pylori strain 381-F-EK9]
MKDKTFQGAFELLTTPKEYLWCGVILSLLLAINLYLEYLNHQKLDFSKPTSLSAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAQFFGKIKPCSFLESLRSCFFQTYSFSLTRKQDFKSHWRHFIDSAHSSALAGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSVSVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLARSLQAISLS
ALVFLNMLIIAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDNILSMPLTIPTISVPSPLWLLGAHLFLT
ILSARSFKVYLSMNVLSTGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=316205 D4K88_RS00860 WP_201736670.1 179392..180705(+) (comEC/comE3) [Helicobacter pylori strain 381-F-EK9]
TTGAAAGACAAAACTTTTCAGGGGGCGTTTGAACTTCTTACAACCCCCAAAGAATACTTATGGTGTGGGGTTATTTTAAG
CCTTTTGTTGGCAATCAATCTTTATTTAGAATACTTGAATCACCAAAAGCTTGATTTTTCAAAACCTACAAGTTTGAGCG
CTCAAATCTTGTTGCAATACCCCAAAACTAAAGATCAAAAAACCTATTTTGTCTTAAAACTCCAATCTAAGGGCATGATC
TTTTACACCACTATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCGCAATTTTTTGGCAAAATCAAACCCTGCTC
GTTTTTGGAGTCTTTAAGATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACACGAAAACAGGATTTCAAATCGCATT
GGCGCCATTTTATTGATAGCGCTCATTCAAGCGCTTTAGCGGGTAATTTGTATCGCGCGTTATTTATAGGGGATAGCTTG
AATAAAGATTTAAGAGATAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGATTCCATTTAGGGATTTT
GAGCGTTAGCGTGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTGTTGCTATTGGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTCTTAAAACACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTTGGCGCGATCTCTTCAAGCTATAAGCTTAAGC
GCACTGGTGTTTTTGAACATGCTCATTATCGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATGCGGTGGGTTTAGGGTCTTTATTGGATAATA
TTCTAAGCATGCCTTTAACAATCCCTACGATTTCGGTTCCTTCGCCCTTATGGCTTTTGGGGGCGCATTTATTTTTAACG
ATTTTAAGTGCGCGTTCTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGCACGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-375)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	95.881	100	0.959