Detailed information NTG0316185

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: D4L09_RS00875
• Genome accession: NZ_CP032474
• Coordinates: 183035..184348 (+)
• Length: 437 a.a.
• NCBI ID: WP_201737477.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 476-C-EK5
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 178035..189348

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4L09_RS00855	crdR	178361..179002 (+)	642	WP_108341526.1	copper response regulator transcription factor CrdR	-
D4L09_RS00860	crdS	178983..180170 (+)	1188	WP_139548874.1	copper-sensing histidine kinase CrdS	-
D4L09_RS00865	-	180173..181567 (+)	1395	WP_139541643.1	NAD(P)H-hydrate dehydratase	-
D4L09_RS00870	-	181578..183038 (+)	1461	WP_000349728.1	replicative DNA helicase	-
D4L09_RS00875	comEC/comE3	183035..184348 (+)	1314	WP_201737477.1	ComEC/Rec2 family competence protein	Machinery gene
D4L09_RS00880	mqnP	184375..185259 (+)	885	WP_139541644.1	menaquinone biosynthesis prenyltransferase MqnP	-
D4L09_RS00885	-	185252..185746 (+)	495	WP_187648986.1	hypothetical protein	-
D4L09_RS00890	-	185759..186265 (+)	507	WP_000958158.1	hypothetical protein	-
D4L09_RS00895	-	186259..187062 (+)	804	WP_139548875.1	phosphatidylserine decarboxylase	-
D4L09_RS00900	nadA	187052..188062 (+)	1011	WP_139548876.1	quinolinate synthase NadA	-
D4L09_RS00905	nadC	188062..188883 (+)	822	WP_139548877.1	carboxylating nicotinate-nucleotide diphosphorylase	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50261.19 Da
• Isoelectric Point: 9.7790

>NTDB_id=316185 D4L09_RS00875 WP_201737477.1 183035..184348(+) (comEC/comE3) [Helicobacter pylori strain 476-C-EK5]
MKDKTFQGAFELLSTPKEYLWCGVFLSLLLAINLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRHAQFFGRIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHWRYFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGARLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTEIFFKTSSFLMRSIQAISLS
ALVFLNMLIIAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDHILSMPLTIPTISVPSPLWLLGVHLFLT
ILSARFFKVYLSMNILSAGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=316185 D4L09_RS00875 WP_201737477.1 183035..184348(+) (comEC/comE3) [Helicobacter pylori strain 476-C-EK5]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTTCAACCCCCAAAGAATACTTATGGTGTGGGGTGTTTTTAAG
CCTTTTGTTGGCAATCAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCGACAAGCTTGAACG
CTCAAATCTTGTTGCAATACCCTAAAACTAAAGATCAAAAAACCTATTTTGTCTTAAAGCTCCAATCAAAGGGCATGATC
TTTTATACCACTATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCATGCGCAATTTTTTGGCAGGATCAAACCCTGCTC
GTTCTTAGAGTCTTTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACGCGAAAACAAGATTTCAAATCGCATT
GGCGCTATTTCATTGACAGCGCTCATTCAAGCGCTTTAGTGGGTAATTTGTATCGCGCGTTATTTATAGGGGATAGCTTG
AATAAAGATTTAAGAGACAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGATTCCATTTAGGGATTTT
GAGCGCGAGCGTGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTATTGCTATTGGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTGTTAGGGTTTTTGGCATGCTTTTTTGGGGCAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTGTTTTTAAAACACACGGAAATTTTTTTTAAAACCTCTTCTTTTTTGATGCGATCTATTCAAGCCATAAGCTTAAGT
GCGTTAGTGTTTTTGAACATGCTCATTATCGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATGCGGTGGGTTTAGGGTCTTTGTTGGATCATA
TTTTAAGCATGCCTTTAACAATCCCTACGATTTCGGTTCCTTCACCCTTATGGCTTTTAGGGGTGCATTTGTTTTTAACG
ATTTTAAGTGCGCGTTTTTTTAAAGTTTATTTAAGCATGAATATTTTGAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-385)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	96.11	100	0.961