Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   E5Q10_RS05510 Genome accession   NZ_CP038808
Coordinates   1050343..1050807 (-) Length   154 a.a.
NCBI ID   WP_001135782.1    Uniprot ID   P59659
Organism   Streptococcus pneumoniae strain R6CIB17     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1045343..1055807
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E5Q10_RS05490 (E5Q10_05490) - 1046294..1047262 (-) 969 WP_000105362.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  E5Q10_RS05495 (E5Q10_05495) pdrM 1047416..1048777 (-) 1362 WP_000278532.1 sodium-coupled multidrug efflux MATE transporter PdrM -
  E5Q10_RS05500 (E5Q10_05500) - 1048788..1049048 (-) 261 WP_001105925.1 hypothetical protein -
  E5Q10_RS05505 (E5Q10_05505) - 1049062..1050330 (-) 1269 WP_000924481.1 dihydroorotase -
  E5Q10_RS05510 (E5Q10_05510) mutX 1050343..1050807 (-) 465 WP_001135782.1 8-oxo-dGTP diphosphatase Machinery gene
  E5Q10_RS05515 (E5Q10_05515) - 1050817..1051470 (-) 654 WP_000401328.1 uracil-DNA glycosylase -
  E5Q10_RS05520 (E5Q10_05520) - 1051606..1052253 (-) 648 WP_001824648.1 hypothetical protein -
  E5Q10_RS05525 (E5Q10_05525) - 1052267..1052980 (-) 714 WP_000499433.1 YjjG family noncanonical pyrimidine nucleotidase -
  E5Q10_RS05530 (E5Q10_05530) dhaM 1053438..1053818 (-) 381 Protein_1046 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  E5Q10_RS11715 - 1053818..1053892 (-) 75 Protein_1047 dihydroxyacetone kinase subunit L -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17870.30 Da        Isoelectric Point: 4.2287

>NTDB_id=315879 E5Q10_RS05510 WP_001135782.1 1050343..1050807(-) (mutX) [Streptococcus pneumoniae strain R6CIB17]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAVREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGMLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=315879 E5Q10_RS05510 WP_001135782.1 1050343..1050807(-) (mutX) [Streptococcus pneumoniae strain R6CIB17]
ATGCCTCAGTTAGCGACGATTTGTTACATTGATAATGGGAAAGAACTGCTCATGCTCCATCGTAATAAGAAACCCAATGA
TGTCCATGAAGGGAAATGGATTGGTGTGGGTGGTAAGCTAGAGAGAGGAGAGACGCCCCAGGAATGCGCGGTACGTGAAA
TCCTTGAAGAAACAGGGCTCAAAGCCAAGCCAGTTCTAAAAGGTGTCATCACTTTTCCTGAATTTACACCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACGGAGTTTGAGGGCGACTTGATTGACTGCAATGAGGGGATGCTAGAATGGGTTCC
CTATGATGAGGTTTTGAGCAAGCCGACCTGGGAAGGTGACCACACCTTTGTTGAGTGGCTTTTAGAGGATAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P59659

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

100

100

1