Detailed information NTG0315859

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: LLB26_RS05305
• Genome accession: NZ_CP032435
• Coordinates: 1070270..1070920 (-)
• Length: 216 a.a.
• NCBI ID: WP_015082373.1
• Uniprot ID: A0AAJ6MHE1
• Organism: Lactococcus cremoris strain B26
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1065270..1075920

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLB26_RS05275 (LLB26_1039)	-	1065461..1066993 (+)	1533	WP_015082368.1	Nramp family divalent metal transporter	-
LLB26_RS05280 (LLB26_1040)	-	1067082..1068035 (+)	954	WP_015082369.1	PhoH family protein	-
LLB26_RS05285 (LLB26_1041)	-	1068105..1068599 (+)	495	WP_015082370.1	NUDIX hydrolase	-
LLB26_RS05290 (LLB26_1042)	ybeY	1068690..1069178 (+)	489	WP_011835335.1	rRNA maturation RNase YbeY	-
LLB26_RS05295 (LLB26_1043)	-	1069162..1069617 (+)	456	WP_015082371.1	diacylglycerol kinase	-
LLB26_RS05300 (LLB26_1044)	-	1069634..1070212 (+)	579	WP_015082372.1	nucleotidyltransferase family protein	-
LLB26_RS05305 (LLB26_1045)	comFC	1070270..1070920 (-)	651	WP_015082373.1	ComF family protein	Machinery gene
LLB26_RS12760 (LLB26_1046)	comFA	1070920..1071432 (-)	513	WP_228763816.1	helicase-related protein	Machinery gene
LLB26_RS12765 (LLB26_1047)	comFA	1071429..1072214 (-)	786	WP_228763967.1	DEAD/DEAH box helicase family protein	Machinery gene
LLB26_RS05315 (LLB26_1048)	-	1072271..1072906 (+)	636	WP_015082374.1	YigZ family protein	-
LLB26_RS05320 (LLB26_1049)	-	1072948..1073448 (+)	501	WP_015082375.1	VanZ family protein	-
LLB26_RS05325 (LLB26_1050)	-	1073535..1074533 (+)	999	WP_237025417.1	DUF475 domain-containing protein	-
LLB26_RS05330 (LLB26_1051)	-	1074642..1075409 (+)	768	WP_011676099.1	5'-nucleotidase	-

Sequence

Protein

• Length: 216 a.a.
• Molecular weight: 25304.70 Da
• Isoelectric Point: 9.9870

>NTDB_id=315859 LLB26_RS05305 WP_015082373.1 1070270..1070920(-) (comFC) [Lactococcus cremoris strain B26]
MQTCLLCSRIIKQTLTFSEFFLLKNKRNLICNKCQSLFKKIPNERCPRCSKSNSKGICADCLKWEEKGIIVNHQSIFIYN
QAMKDYFSLYKFMGDYRLHEVFDSYFKNLSKKIPLVPIPVSPKRLQERGFNQVTAFLKDRAYLYLLEKEDIVRQSSLNRE
GRLSTSNPFKLKEGEKIPQKIILIDDIYTTGTTFYHAIKTLKKANPIEITTFSLCR

Nucleotide

• Length: 651 bp

>NTDB_id=315859 LLB26_RS05305 WP_015082373.1 1070270..1070920(-) (comFC) [Lactococcus cremoris strain B26]
ATGCAAACTTGTCTGCTTTGTTCCAGAATTATCAAACAAACACTCACTTTTAGTGAATTCTTTTTACTAAAGAATAAGAG
AAATTTAATATGCAATAAATGCCAATCACTGTTTAAAAAAATTCCTAACGAACGTTGTCCTCGTTGCTCTAAATCTAACT
CTAAAGGTATATGTGCTGACTGTCTCAAGTGGGAAGAAAAAGGAATCATTGTTAATCATCAGTCAATTTTTATTTATAAC
CAAGCAATGAAGGATTACTTTAGTCTTTACAAATTTATGGGAGATTATCGATTACACGAAGTCTTCGATTCCTATTTTAA
AAATTTGTCCAAAAAAATTCCTCTGGTTCCCATTCCGGTTTCTCCTAAAAGATTACAAGAAAGAGGTTTTAACCAAGTAA
CAGCTTTTCTAAAAGATAGAGCTTATCTTTATTTGCTTGAAAAAGAGGATATTGTCAGACAATCAAGTCTTAATCGCGAG
GGACGTCTATCAACTAGCAATCCTTTTAAGTTGAAAGAGGGTGAAAAAATACCCCAAAAAATCATTTTGATTGATGATAT
TTATACAACTGGAACTACTTTTTATCATGCAATAAAAACCTTAAAGAAAGCTAATCCGATTGAAATTACAACTTTCTCAC
TCTGCCGTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Lactococcus lactis subsp. cremoris KW2	97.015	62.037	0.602
comFC/cflB	Streptococcus mitis NCTC 12261	49.083	100	0.495
comFC/cflB	Streptococcus mitis SK321	47.248	100	0.477
comFC/cflB	Streptococcus pneumoniae Rx1	46.789	100	0.472
comFC/cflB	Streptococcus pneumoniae D39	46.789	100	0.472
comFC/cflB	Streptococcus pneumoniae R6	46.789	100	0.472
comFC/cflB	Streptococcus pneumoniae TIGR4	46.789	100	0.472
comFC	Bacillus subtilis subsp. subtilis str. 168	34.802	100	0.366