Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | D5R90_RS08450 | Genome accession | NZ_CP032400 |
| Coordinates | 1728084..1730339 (-) | Length | 751 a.a. |
| NCBI ID | WP_003101055.1 | Uniprot ID | A0A3L8GMV5 |
| Organism | Streptococcus iniae strain YM011 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1723084..1735339
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5R90_RS08430 (D5R90_08430) | - | 1723188..1723949 (+) | 762 | WP_003101047.1 | DivIVA domain-containing protein | - |
| D5R90_RS08435 (D5R90_08435) | ileS | 1724204..1726996 (+) | 2793 | WP_003101049.1 | isoleucine--tRNA ligase | - |
| D5R90_RS08440 (D5R90_08440) | - | 1727152..1727454 (-) | 303 | WP_003101050.1 | DUF1827 family protein | - |
| D5R90_RS08445 (D5R90_08445) | - | 1727511..1727957 (-) | 447 | WP_003101052.1 | NUDIX hydrolase | - |
| D5R90_RS08450 (D5R90_08450) | clpE | 1728084..1730339 (-) | 2256 | WP_003101055.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| D5R90_RS08455 (D5R90_08455) | - | 1730597..1730827 (+) | 231 | WP_003101057.1 | YkuJ family protein | - |
| D5R90_RS08460 (D5R90_08460) | - | 1730945..1731634 (+) | 690 | WP_003101059.1 | amino acid ABC transporter permease | - |
| D5R90_RS08465 (D5R90_08465) | - | 1731631..1732365 (+) | 735 | WP_003101061.1 | amino acid ABC transporter ATP-binding protein | - |
| D5R90_RS08470 (D5R90_08470) | - | 1732441..1733298 (+) | 858 | WP_003101063.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | - |
| D5R90_RS08475 (D5R90_08475) | xseA | 1733422..1734750 (+) | 1329 | WP_003101065.1 | exodeoxyribonuclease VII large subunit | - |
| D5R90_RS08480 (D5R90_08480) | - | 1734740..1734955 (+) | 216 | WP_003101067.1 | exodeoxyribonuclease VII small subunit | - |
Sequence
Protein
Download Length: 751 a.a. Molecular weight: 84158.51 Da Isoelectric Point: 5.4009
>NTDB_id=315467 D5R90_RS08450 WP_003101055.1 1728084..1730339(-) (clpE) [Streptococcus iniae strain YM011]
MLCQNCNLNEASIHLYTSLNGKQKQVDLCQNCYQIMKTDANNPILGGLHSKRQDSSISPFFDDFFGDLNHFKPFGQLPNT
PQGNNQQPPIRNDGQQQGHQQTTSAPAPQGLLEEFGINITDMAKNGDIDPVIGRDEEIVRVIEILNRRTKNNPVLIGEPG
VGKTAVVEGLAQKIVDGEVPHKLQHKQVIRLDVVSLVQGTGIRGQFEERMQKLMDEIRQRNDVILFIDEIHEIVGAGSAG
DGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETLIILKGIQAKYESYHHVKYSQDAI
EAAAHLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKEIDKRLLEAENLKTQATRNEDYERAAYFRDQITKYKEMQ
KQKLDDQDIPIITEKTIEAIVEQKTNIPVGDLKEKEQSQLVHLADDLKKHVIGQDEAVTKIAKAIRRNRVGLGSPNRPIG
SFLFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVSKLVGAPPGYVGYDEAGQLTEKVRRNPYSLILLDEV
EKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKVEASVGFGATREGRSQSVLGQLGNFFSPEFMNRFD
GIIEFQALSKDNLLHIVDLMLDDINQRLEHNGLHLEVTQKVKEKLVDLGYDPKMGARPLRRTLQEHIEDAITDFYLENPS
EKDLRAIMTSNGQIVIKSNKKNEVTSYETPQ
MLCQNCNLNEASIHLYTSLNGKQKQVDLCQNCYQIMKTDANNPILGGLHSKRQDSSISPFFDDFFGDLNHFKPFGQLPNT
PQGNNQQPPIRNDGQQQGHQQTTSAPAPQGLLEEFGINITDMAKNGDIDPVIGRDEEIVRVIEILNRRTKNNPVLIGEPG
VGKTAVVEGLAQKIVDGEVPHKLQHKQVIRLDVVSLVQGTGIRGQFEERMQKLMDEIRQRNDVILFIDEIHEIVGAGSAG
DGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETLIILKGIQAKYESYHHVKYSQDAI
EAAAHLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKEIDKRLLEAENLKTQATRNEDYERAAYFRDQITKYKEMQ
KQKLDDQDIPIITEKTIEAIVEQKTNIPVGDLKEKEQSQLVHLADDLKKHVIGQDEAVTKIAKAIRRNRVGLGSPNRPIG
SFLFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVSKLVGAPPGYVGYDEAGQLTEKVRRNPYSLILLDEV
EKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKVEASVGFGATREGRSQSVLGQLGNFFSPEFMNRFD
GIIEFQALSKDNLLHIVDLMLDDINQRLEHNGLHLEVTQKVKEKLVDLGYDPKMGARPLRRTLQEHIEDAITDFYLENPS
EKDLRAIMTSNGQIVIKSNKKNEVTSYETPQ
Nucleotide
Download Length: 2256 bp
>NTDB_id=315467 D5R90_RS08450 WP_003101055.1 1728084..1730339(-) (clpE) [Streptococcus iniae strain YM011]
ATGCTTTGTCAAAACTGTAACTTAAACGAAGCTTCCATTCACTTGTATACAAGCTTAAATGGTAAGCAAAAACAAGTCGA
TTTATGTCAAAATTGCTATCAAATTATGAAAACAGATGCTAACAATCCAATTTTGGGAGGTCTTCATTCTAAAAGACAAG
ATTCTTCTATCAGTCCTTTCTTTGATGATTTTTTTGGTGATTTAAATCATTTTAAACCCTTTGGTCAATTGCCAAACACT
CCGCAAGGCAACAACCAACAGCCCCCTATTAGAAACGACGGGCAACAACAAGGCCATCAGCAAACAACAAGCGCTCCTGC
TCCTCAAGGACTTCTTGAAGAGTTTGGTATCAATATTACAGATATGGCTAAAAATGGTGATATTGACCCGGTTATCGGAC
GTGATGAGGAAATCGTGCGTGTTATCGAAATTTTAAACCGTAGAACGAAAAATAATCCCGTTTTGATTGGTGAACCTGGC
GTTGGGAAAACAGCAGTTGTCGAAGGCTTGGCACAAAAGATTGTTGATGGAGAAGTCCCTCACAAACTCCAGCATAAACA
AGTTATCCGCCTAGATGTGGTCAGTCTTGTTCAAGGAACTGGCATTCGTGGTCAATTTGAAGAGCGTATGCAAAAACTGA
TGGATGAAATCCGTCAACGCAATGATGTCATCTTATTTATTGATGAAATCCATGAAATTGTTGGTGCTGGTAGCGCTGGC
GATGGCAATATGGATGCCGGTAATATTTTAAAACCTGCTCTAGCTCGTGGCGAGTTGCAATTAGTTGGTGCTACTACCCT
TAATGAATACCGTATCATTGAAAAAGATGCCGCTCTTGAGCGGCGAATGCAACCTGTTAAGGTAGATGAACCATCTGTTG
AAGAAACCCTTATTATTTTAAAAGGGATTCAGGCAAAATATGAAAGCTACCATCATGTTAAGTATAGCCAAGATGCTATT
GAAGCCGCAGCTCATTTATCAAATCGTTACATCCAAGATCGTTTCTTACCTGACAAGGCTATTGATCTTCTTGATGAGGC
GGGATCTAAAATGAACTTAACACTCAATTTTGTTGACCCTAAAGAAATTGATAAACGCTTGCTTGAAGCTGAAAATCTAA
AAACTCAAGCAACGCGTAATGAGGATTATGAACGCGCAGCATACTTCCGCGATCAAATTACCAAGTATAAAGAAATGCAA
AAGCAAAAATTGGATGATCAGGATATTCCTATTATTACCGAGAAAACCATTGAAGCAATTGTTGAGCAAAAAACCAATAT
TCCTGTTGGCGATTTGAAAGAAAAAGAGCAATCTCAATTGGTTCATTTGGCAGATGATTTGAAAAAACATGTTATTGGTC
AAGATGAGGCTGTCACAAAGATTGCTAAAGCTATTCGCCGCAACAGAGTGGGACTAGGCAGCCCTAATCGACCAATTGGC
TCCTTCCTTTTTGTTGGACCTACCGGTGTTGGGAAAACAGAATTGTCTAAACAATTAGCTATTGAACTTTTCGGTTCTGC
TGATAATATGATTCGATTTGACATGTCAGAATATATGGAAAAACACGCAGTATCAAAACTTGTCGGTGCTCCTCCAGGAT
ATGTTGGTTATGATGAAGCAGGTCAATTAACAGAAAAAGTTCGTCGTAACCCATACTCTCTTATCCTTTTAGATGAGGTT
GAAAAAGCACATCCAGATGTTATGCATATGTTCCTTCAAGTGTTAGATGATGGACGTTTAACAGATGGACAAGGCCGCAC
TGTCAGTTTCAAAGACACTATCATTATCATGACATCAAACGCAGGAACTGGTAAAGTCGAAGCCTCTGTTGGATTTGGTG
CTACTCGTGAGGGGCGTTCACAGTCTGTTTTAGGTCAACTCGGGAACTTCTTTAGCCCTGAATTCATGAACCGTTTTGAT
GGTATCATTGAATTCCAAGCACTTAGCAAGGATAATCTCTTACATATTGTTGATTTGATGTTAGATGATATTAATCAAAG
ACTTGAACACAACGGCCTTCATTTAGAGGTGACTCAAAAAGTAAAAGAAAAATTAGTTGATTTAGGCTATGATCCTAAAA
TGGGAGCTCGGCCATTGCGTCGTACCCTACAAGAACACATTGAAGATGCTATCACTGATTTTTACTTGGAAAATCCAAGC
GAAAAAGATTTACGCGCCATCATGACAAGTAATGGTCAGATTGTCATTAAATCAAATAAAAAGAATGAAGTGACAAGTTA
CGAAACACCACAATAA
ATGCTTTGTCAAAACTGTAACTTAAACGAAGCTTCCATTCACTTGTATACAAGCTTAAATGGTAAGCAAAAACAAGTCGA
TTTATGTCAAAATTGCTATCAAATTATGAAAACAGATGCTAACAATCCAATTTTGGGAGGTCTTCATTCTAAAAGACAAG
ATTCTTCTATCAGTCCTTTCTTTGATGATTTTTTTGGTGATTTAAATCATTTTAAACCCTTTGGTCAATTGCCAAACACT
CCGCAAGGCAACAACCAACAGCCCCCTATTAGAAACGACGGGCAACAACAAGGCCATCAGCAAACAACAAGCGCTCCTGC
TCCTCAAGGACTTCTTGAAGAGTTTGGTATCAATATTACAGATATGGCTAAAAATGGTGATATTGACCCGGTTATCGGAC
GTGATGAGGAAATCGTGCGTGTTATCGAAATTTTAAACCGTAGAACGAAAAATAATCCCGTTTTGATTGGTGAACCTGGC
GTTGGGAAAACAGCAGTTGTCGAAGGCTTGGCACAAAAGATTGTTGATGGAGAAGTCCCTCACAAACTCCAGCATAAACA
AGTTATCCGCCTAGATGTGGTCAGTCTTGTTCAAGGAACTGGCATTCGTGGTCAATTTGAAGAGCGTATGCAAAAACTGA
TGGATGAAATCCGTCAACGCAATGATGTCATCTTATTTATTGATGAAATCCATGAAATTGTTGGTGCTGGTAGCGCTGGC
GATGGCAATATGGATGCCGGTAATATTTTAAAACCTGCTCTAGCTCGTGGCGAGTTGCAATTAGTTGGTGCTACTACCCT
TAATGAATACCGTATCATTGAAAAAGATGCCGCTCTTGAGCGGCGAATGCAACCTGTTAAGGTAGATGAACCATCTGTTG
AAGAAACCCTTATTATTTTAAAAGGGATTCAGGCAAAATATGAAAGCTACCATCATGTTAAGTATAGCCAAGATGCTATT
GAAGCCGCAGCTCATTTATCAAATCGTTACATCCAAGATCGTTTCTTACCTGACAAGGCTATTGATCTTCTTGATGAGGC
GGGATCTAAAATGAACTTAACACTCAATTTTGTTGACCCTAAAGAAATTGATAAACGCTTGCTTGAAGCTGAAAATCTAA
AAACTCAAGCAACGCGTAATGAGGATTATGAACGCGCAGCATACTTCCGCGATCAAATTACCAAGTATAAAGAAATGCAA
AAGCAAAAATTGGATGATCAGGATATTCCTATTATTACCGAGAAAACCATTGAAGCAATTGTTGAGCAAAAAACCAATAT
TCCTGTTGGCGATTTGAAAGAAAAAGAGCAATCTCAATTGGTTCATTTGGCAGATGATTTGAAAAAACATGTTATTGGTC
AAGATGAGGCTGTCACAAAGATTGCTAAAGCTATTCGCCGCAACAGAGTGGGACTAGGCAGCCCTAATCGACCAATTGGC
TCCTTCCTTTTTGTTGGACCTACCGGTGTTGGGAAAACAGAATTGTCTAAACAATTAGCTATTGAACTTTTCGGTTCTGC
TGATAATATGATTCGATTTGACATGTCAGAATATATGGAAAAACACGCAGTATCAAAACTTGTCGGTGCTCCTCCAGGAT
ATGTTGGTTATGATGAAGCAGGTCAATTAACAGAAAAAGTTCGTCGTAACCCATACTCTCTTATCCTTTTAGATGAGGTT
GAAAAAGCACATCCAGATGTTATGCATATGTTCCTTCAAGTGTTAGATGATGGACGTTTAACAGATGGACAAGGCCGCAC
TGTCAGTTTCAAAGACACTATCATTATCATGACATCAAACGCAGGAACTGGTAAAGTCGAAGCCTCTGTTGGATTTGGTG
CTACTCGTGAGGGGCGTTCACAGTCTGTTTTAGGTCAACTCGGGAACTTCTTTAGCCCTGAATTCATGAACCGTTTTGAT
GGTATCATTGAATTCCAAGCACTTAGCAAGGATAATCTCTTACATATTGTTGATTTGATGTTAGATGATATTAATCAAAG
ACTTGAACACAACGGCCTTCATTTAGAGGTGACTCAAAAAGTAAAAGAAAAATTAGTTGATTTAGGCTATGATCCTAAAA
TGGGAGCTCGGCCATTGCGTCGTACCCTACAAGAACACATTGAAGATGCTATCACTGATTTTTACTTGGAAAATCCAAGC
GAAAAAGATTTACGCGCCATCATGACAAGTAATGGTCAGATTGTCATTAAATCAAATAAAAAGAATGAAGTGACAAGTTA
CGAAACACCACAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
83.001 |
100 |
0.832 |
| clpE | Streptococcus pneumoniae Rx1 |
80.559 |
100 |
0.806 |
| clpE | Streptococcus pneumoniae D39 |
80.559 |
100 |
0.806 |
| clpE | Streptococcus pneumoniae R6 |
80.559 |
100 |
0.806 |
| clpE | Streptococcus pneumoniae TIGR4 |
80.426 |
100 |
0.804 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
75.066 |
100 |
0.754 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
51.897 |
87.75 |
0.455 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
45.372 |
87.75 |
0.398 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.411 |
83.489 |
0.387 |
| clpC | Streptococcus pneumoniae Rx1 |
46.411 |
83.489 |
0.387 |
| clpC | Streptococcus pneumoniae D39 |
46.411 |
83.489 |
0.387 |
| clpC | Streptococcus mutans UA159 |
46.688 |
82.423 |
0.385 |
| clpC | Streptococcus thermophilus LMD-9 |
46.602 |
82.29 |
0.383 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.278 |
82.29 |
0.381 |