Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   D4A37_RS06130 Genome accession   NZ_CP032365
Coordinates   1181130..1181813 (+) Length   227 a.a.
NCBI ID   WP_000350721.1    Uniprot ID   A0A1D3NUE3
Organism   Bacillus wiedmannii strain SR52     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1176130..1186813
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D4A37_RS06110 - 1177196..1178842 (+) 1647 WP_000727246.1 peptide ABC transporter substrate-binding protein -
  D4A37_RS06115 - 1178870..1179073 (-) 204 WP_000559978.1 hypothetical protein -
  D4A37_RS06120 spx 1179668..1180063 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  D4A37_RS06125 - 1180113..1180787 (-) 675 WP_000362605.1 TerC family protein -
  D4A37_RS06130 mecA 1181130..1181813 (+) 684 WP_000350721.1 adaptor protein MecA Regulator
  D4A37_RS06135 - 1181886..1183430 (+) 1545 WP_000799209.1 cardiolipin synthase -
  D4A37_RS06140 - 1183511..1184755 (+) 1245 WP_048567030.1 competence protein CoiA family protein -
  D4A37_RS06145 pepF 1184806..1186632 (+) 1827 WP_000003404.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26964.08 Da        Isoelectric Point: 4.0424

>NTDB_id=315190 D4A37_RS06130 WP_000350721.1 1181130..1181813(+) (mecA) [Bacillus wiedmannii strain SR52]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEKQAGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=315190 D4A37_RS06130 WP_000350721.1 1181130..1181813(+) (mecA) [Bacillus wiedmannii strain SR52]
TTGGATATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGGTTTAATCG
TGAAGAAATTTGGTATGACCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGATGATT
TCTTTATTGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCAGAGCTT
TCAAAGGATGGACAAAAGCTAGAACTACCAATAGGTGTAGATAAAATTATAGACATTCCTCTAGATGAAGGCATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAGAAACAAGCAGGAACAAACTTTAACGAAGATGGTACGTTTGGATTTT
TAATTAAATTTAATGATTTTGAAGATGTCATTTCATTAAGCCACCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGATCGTATTTTAAG
TATTGTTTTAGAATACGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1D3NUE3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564


Multiple sequence alignment