Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   D3Z18_RS08905 Genome accession   NZ_CP032316
Coordinates   1643788..1644756 (+) Length   322 a.a.
NCBI ID   WP_002872671.1    Uniprot ID   Q0P8Q7
Organism   Campylobacter jejuni subsp. jejuni strain HPC5     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1638788..1649756
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D3Z18_RS08880 (D3Z18_08880) cdsA 1639698..1640423 (-) 726 WP_002834214.1 phosphatidate cytidylyltransferase -
  D3Z18_RS08885 (D3Z18_08885) - 1640432..1640770 (-) 339 WP_002852397.1 hypothetical protein -
  D3Z18_RS08890 (D3Z18_08890) - 1640772..1642079 (-) 1308 WP_038401615.1 NFACT family protein -
  D3Z18_RS08895 (D3Z18_08895) mobA 1642141..1642716 (+) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  D3Z18_RS08900 (D3Z18_08900) pldA 1642713..1643702 (+) 990 WP_002864239.1 phospholipase A -
  D3Z18_RS08905 (D3Z18_08905) ceuB 1643788..1644756 (+) 969 WP_002872671.1 ABC transporter permease Machinery gene
  D3Z18_RS08910 (D3Z18_08910) ceuC 1644749..1645687 (+) 939 WP_002854141.1 iron chelate uptake ABC transporter family permease subunit -
  D3Z18_RS08915 (D3Z18_08915) ceuD 1645684..1646439 (+) 756 WP_038401617.1 ABC transporter ATP-binding protein -
  D3Z18_RS08920 (D3Z18_08920) ceuB 1646452..1647444 (+) 993 WP_038401619.1 enterochelin ABC transporter substrate-binding protein CeuB -
  D3Z18_RS08930 (D3Z18_08930) - 1647670..1648224 (-) 555 WP_002892921.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35469.40 Da        Isoelectric Point: 9.6678

>NTDB_id=314991 D3Z18_RS08905 WP_002872671.1 1643788..1644756(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain HPC5]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=314991 D3Z18_RS08905 WP_002872671.1 1643788..1644756(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain HPC5]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGGTCTTTAATCTTTATCTTTCTTTTACTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0P8Q7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991

Multiple sequence alignment