Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | D3Z18_RS07570 | Genome accession | NZ_CP032316 |
| Coordinates | 1376697..1376999 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni strain HPC5 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1371697..1381999
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D3Z18_RS07545 (D3Z18_07545) | rpsR | 1372060..1372320 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| D3Z18_RS07550 (D3Z18_07550) | lon | 1372380..1374755 (-) | 2376 | WP_002885146.1 | endopeptidase La | - |
| D3Z18_RS07555 (D3Z18_07555) | - | 1374772..1375419 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| D3Z18_RS07560 (D3Z18_07560) | fliW | 1375580..1375969 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| D3Z18_RS07565 (D3Z18_07565) | proC | 1375969..1376700 (+) | 732 | WP_038401410.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| D3Z18_RS07570 (D3Z18_07570) | ctsT | 1376697..1376999 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| D3Z18_RS07575 (D3Z18_07575) | - | 1376996..1377658 (+) | 663 | WP_038401412.1 | hypothetical protein | - |
| D3Z18_RS07580 (D3Z18_07580) | - | 1377655..1378107 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| D3Z18_RS07585 (D3Z18_07585) | hemD | 1378104..1378733 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| D3Z18_RS07590 (D3Z18_07590) | thiE | 1378711..1379343 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| D3Z18_RS07595 (D3Z18_07595) | thiD | 1379333..1380145 (-) | 813 | WP_038401955.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| D3Z18_RS07600 (D3Z18_07600) | - | 1380142..1380828 (-) | 687 | WP_038401414.1 | nuclease | - |
| D3Z18_RS07605 (D3Z18_07605) | - | 1380825..1381586 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=314984 D3Z18_RS07570 WP_002853046.1 1376697..1376999(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain HPC5]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=314984 D3Z18_RS07570 WP_002853046.1 1376697..1376999(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain HPC5]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |