Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | D3Z87_RS13505 | Genome accession | NZ_CP032310 |
| Coordinates | 2557609..2558646 (-) | Length | 345 a.a. |
| NCBI ID | WP_009967727.1 | Uniprot ID | A0AAE2SM96 |
| Organism | Bacillus subtilis strain WB800N | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2552609..2563646
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D3Z87_RS13455 (D3Z87_13370) | tasA | 2552707..2553492 (-) | 786 | WP_004398632.1 | biofilm matrix protein TasA | - |
| D3Z87_RS13460 (D3Z87_13375) | sipW | 2553556..2554128 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| D3Z87_RS13465 (D3Z87_13380) | tapA | 2554112..2554873 (-) | 762 | WP_004399106.1 | amyloid fiber anchoring/assembly protein TapA | - |
| D3Z87_RS13470 (D3Z87_13385) | yqzG | 2555145..2555471 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| D3Z87_RS13475 (D3Z87_13390) | spoIITA | 2555513..2555692 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| D3Z87_RS13480 (D3Z87_13395) | comGG | 2555763..2556137 (-) | 375 | WP_003230170.1 | ComG operon protein ComGG | Machinery gene |
| D3Z87_RS13485 (D3Z87_13400) | comGF | 2556138..2556521 (-) | 384 | WP_003230168.1 | ComG operon protein ComGF | Machinery gene |
| D3Z87_RS13490 (D3Z87_13405) | comGE | 2556547..2556894 (-) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| D3Z87_RS13495 (D3Z87_13410) | comGD | 2556878..2557309 (-) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| D3Z87_RS13500 (D3Z87_13415) | comGC | 2557299..2557595 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| D3Z87_RS13505 (D3Z87_13420) | comGB | 2557609..2558646 (-) | 1038 | WP_009967727.1 | comG operon protein ComGB | Machinery gene |
| D3Z87_RS13510 (D3Z87_13425) | comGA | 2558633..2559703 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| D3Z87_RS13520 (D3Z87_13435) | corA | 2560115..2561068 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| D3Z87_RS13525 (D3Z87_13440) | yqhB | 2561211..2562539 (+) | 1329 | WP_009967730.1 | hemolysin family protein | - |
| D3Z87_RS13530 (D3Z87_13445) | rsbRD | 2562592..2563428 (-) | 837 | WP_004398754.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39762.26 Da Isoelectric Point: 9.6257
>NTDB_id=314903 D3Z87_RS13505 WP_009967727.1 2557609..2558646(-) (comGB) [Bacillus subtilis strain WB800N]
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSLFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSLFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=314903 D3Z87_RS13505 WP_009967727.1 2557609..2558646(-) (comGB) [Bacillus subtilis strain WB800N]
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCTTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCTTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
93.623 |
0.936 |