Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   D3Z87_RS07930 Genome accession   NZ_CP032310
Coordinates   1495166..1495741 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain WB800N     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1490166..1500741
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D3Z87_RS07900 (D3Z87_07875) dapD 1490352..1491062 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  D3Z87_RS07905 (D3Z87_07880) dapI 1491132..1492256 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  D3Z87_RS07910 (D3Z87_07885) ykuS 1492318..1492563 (+) 246 WP_003232382.1 YkuS family protein -
  D3Z87_RS07915 (D3Z87_07890) mscT 1492600..1493403 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  D3Z87_RS07920 (D3Z87_07895) ahpA 1493640..1494182 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  D3Z87_RS07925 (D3Z87_07900) ykuV 1494254..1494700 (+) 447 WP_003245810.1 thiol-disulfide oxidoreductase YkuV -
  D3Z87_RS07930 (D3Z87_07905) rok 1495166..1495741 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  D3Z87_RS07935 (D3Z87_07910) cse15 1495782..1496747 (-) 966 WP_003245018.1 spore protein Cse15 -
  D3Z87_RS07940 (D3Z87_07915) mobA 1496884..1497483 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  D3Z87_RS07945 (D3Z87_07920) moeB 1497534..1498553 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  D3Z87_RS07950 (D3Z87_07925) glp 1498571..1499863 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  D3Z87_RS07955 (D3Z87_07930) mobB 1499824..1500345 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=314887 D3Z87_RS07930 WP_003232378.1 1495166..1495741(+) (rok) [Bacillus subtilis strain WB800N]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=314887 D3Z87_RS07930 WP_003232378.1 1495166..1495741(+) (rok) [Bacillus subtilis strain WB800N]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment