Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | CDG62_RS18025 | Genome accession | NZ_CP032286 |
| Coordinates | 3167883..3168206 (-) | Length | 107 a.a. |
| NCBI ID | WP_004692786.1 | Uniprot ID | N9D026 |
| Organism | Acinetobacter sp. WCHA55 | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3162883..3173206
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDG62_RS18005 (CDG62_18010) | - | 3162929..3163672 (-) | 744 | WP_087528592.1 | FHA domain-containing protein | - |
| CDG62_RS18010 (CDG62_18015) | gspD | 3163760..3166111 (-) | 2352 | WP_087528591.1 | type II secretion system secretin GspD | - |
| CDG62_RS18015 (CDG62_18020) | - | 3166151..3166975 (-) | 825 | WP_087528590.1 | type II secretion system protein N | - |
| CDG62_RS18020 (CDG62_18025) | gspN | 3166975..3167685 (-) | 711 | WP_087528589.1 | type II secretion system protein N | - |
| CDG62_RS18025 (CDG62_18030) | hns | 3167883..3168206 (-) | 324 | WP_004692786.1 | H-NS family nucleoid-associated regulatory protein | Regulator |
| CDG62_RS18030 (CDG62_18035) | - | 3168359..3168787 (-) | 429 | WP_087528588.1 | acyl-CoA thioesterase | - |
| CDG62_RS18035 (CDG62_18040) | - | 3168795..3169988 (-) | 1194 | WP_087528587.1 | heme biosynthesis protein HemY | - |
| CDG62_RS18040 (CDG62_18045) | - | 3169993..3170835 (-) | 843 | WP_087528586.1 | hypothetical protein | - |
| CDG62_RS18045 (CDG62_18050) | - | 3170832..3171611 (-) | 780 | WP_087528585.1 | uroporphyrinogen-III synthase | - |
| CDG62_RS18050 (CDG62_18055) | hemC | 3171624..3172544 (-) | 921 | WP_087528584.1 | hydroxymethylbilane synthase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12025.75 Da Isoelectric Point: 9.5383
>NTDB_id=314760 CDG62_RS18025 WP_004692786.1 3167883..3168206(-) (hns) [Acinetobacter sp. WCHA55]
MPDISNLSVEELKRLQIEAEALIASKKDQAIEDAYTQINAIAENVGLSIEQILEFGATKRKKGTRKSVEPRYRNKGNAAE
TWTGRGKQPRWLVAQLEKGAKLEDFLI
MPDISNLSVEELKRLQIEAEALIASKKDQAIEDAYTQINAIAENVGLSIEQILEFGATKRKKGTRKSVEPRYRNKGNAAE
TWTGRGKQPRWLVAQLEKGAKLEDFLI
Nucleotide
Download Length: 324 bp
>NTDB_id=314760 CDG62_RS18025 WP_004692786.1 3167883..3168206(-) (hns) [Acinetobacter sp. WCHA55]
ATGCCAGATATTAGTAATTTATCCGTAGAAGAGTTAAAGCGTCTACAAATCGAAGCGGAAGCTTTAATTGCATCTAAAAA
AGATCAAGCAATTGAAGATGCTTATACCCAAATTAACGCGATTGCGGAAAATGTAGGCTTAAGCATTGAACAAATTTTAG
AGTTTGGCGCGACTAAGCGTAAAAAAGGCACACGTAAGTCGGTTGAACCACGTTACCGTAACAAAGGCAATGCTGCGGAG
ACATGGACTGGCCGTGGTAAGCAACCACGTTGGTTAGTGGCTCAGTTAGAAAAAGGTGCGAAGCTTGAAGATTTTCTAAT
CTAA
ATGCCAGATATTAGTAATTTATCCGTAGAAGAGTTAAAGCGTCTACAAATCGAAGCGGAAGCTTTAATTGCATCTAAAAA
AGATCAAGCAATTGAAGATGCTTATACCCAAATTAACGCGATTGCGGAAAATGTAGGCTTAAGCATTGAACAAATTTTAG
AGTTTGGCGCGACTAAGCGTAAAAAAGGCACACGTAAGTCGGTTGAACCACGTTACCGTAACAAAGGCAATGCTGCGGAG
ACATGGACTGGCCGTGGTAAGCAACCACGTTGGTTAGTGGCTCAGTTAGAAAAAGGTGCGAAGCTTGAAGATTTTCTAAT
CTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
86.792 |
99.065 |
0.86 |