Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   BEN74_RS13180 Genome accession   NZ_CP032279
Coordinates   2409705..2410583 (+) Length   292 a.a.
NCBI ID   WP_086374260.1    Uniprot ID   -
Organism   Acinetobacter sp. WCHAc010034     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2404705..2415583
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEN74_RS13150 (BEN74_13150) wrbA 2405455..2406045 (+) 591 WP_068909522.1 NAD(P)H:quinone oxidoreductase -
  BEN74_RS13155 (BEN74_13155) - 2406360..2406545 (+) 186 WP_068909520.1 hypothetical protein -
  BEN74_RS13160 (BEN74_13160) - 2406612..2407016 (-) 405 WP_068909518.1 hypothetical protein -
  BEN74_RS13165 (BEN74_13165) - 2407240..2407815 (-) 576 WP_068909516.1 xanthine phosphoribosyltransferase -
  BEN74_RS13170 (BEN74_13170) - 2407905..2408618 (-) 714 WP_068909514.1 DUF3108 domain-containing protein -
  BEN74_RS13175 (BEN74_13175) - 2408779..2409462 (-) 684 WP_068909512.1 hypothetical protein -
  BEN74_RS13180 (BEN74_13180) tonB2 2409705..2410583 (+) 879 WP_086374260.1 energy transducer TonB Machinery gene
  BEN74_RS13185 (BEN74_13185) - 2410629..2411027 (-) 399 WP_068909510.1 hypothetical protein -
  BEN74_RS13190 (BEN74_13190) ybeY 2411133..2411612 (-) 480 WP_068909508.1 rRNA maturation RNase YbeY -
  BEN74_RS13195 (BEN74_13195) - 2411632..2412708 (-) 1077 WP_068909505.1 PhoH family protein -
  BEN74_RS13200 (BEN74_13200) miaB 2412746..2414203 (-) 1458 WP_068909503.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 292 a.a.        Molecular weight: 33106.77 Da        Isoelectric Point: 9.4548

>NTDB_id=314721 BEN74_RS13180 WP_086374260.1 2409705..2410583(+) (tonB2) [Acinetobacter sp. WCHAc010034]
MLKKMTFKPLSHGWWKDPVFAGAVGVAAALHLAVLTMQFAMPQESEVTTKEIAVSLRPSDAKIEHADFLAQADQQGSGKF
REQHRISADMPAPMVDQTAGEQVQEALEKLQQKRELKFEEKVLMTALSWQKQAEENQRKKTADEMQSQFQAKAAMIASIE
AQYLQRQQNFSRQQKIKTIDGIQAKQDNTAAYMEKFRQKVEFYGNRYYPDSAKQQNLAGEVRLMVILNQNGGIRAIRLIE
SSGHSILDEAAKTSVRKAAPFGGFDAKMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 879 bp        

>NTDB_id=314721 BEN74_RS13180 WP_086374260.1 2409705..2410583(+) (tonB2) [Acinetobacter sp. WCHAc010034]
ATGCTGAAAAAAATGACCTTTAAGCCGCTAAGTCACGGCTGGTGGAAAGATCCGGTTTTTGCCGGCGCTGTAGGCGTGGC
TGCCGCTTTGCATCTGGCTGTGCTGACGATGCAGTTCGCCATGCCGCAGGAAAGCGAGGTCACGACCAAGGAAATCGCGG
TGTCCCTGCGTCCGAGCGATGCCAAAATTGAGCATGCCGATTTCCTGGCGCAGGCGGACCAGCAGGGTTCAGGCAAGTTC
CGCGAGCAGCACCGCATTTCGGCCGATATGCCGGCGCCGATGGTCGATCAGACTGCAGGCGAGCAGGTGCAGGAAGCGCT
GGAAAAGCTGCAGCAGAAGCGCGAGCTGAAGTTTGAAGAAAAAGTGCTGATGACCGCGCTGAGCTGGCAGAAGCAGGCGG
AAGAAAATCAGCGCAAGAAAACCGCAGATGAAATGCAAAGCCAGTTTCAGGCCAAAGCCGCGATGATTGCCAGCATTGAA
GCGCAGTACCTGCAGCGGCAGCAGAATTTCAGCCGGCAGCAGAAAATCAAGACCATCGACGGCATTCAGGCCAAGCAGGA
CAACACCGCGGCCTATATGGAAAAGTTCCGGCAGAAAGTGGAGTTCTACGGCAACCGCTATTATCCGGACAGCGCCAAGC
AGCAGAATCTGGCCGGAGAAGTCCGCCTGATGGTGATTCTGAACCAGAACGGCGGCATCCGCGCCATCCGCTTAATTGAA
AGTTCCGGGCACAGCATTCTGGATGAGGCGGCCAAAACTTCGGTGCGCAAGGCCGCGCCTTTTGGCGGATTTGACGCCAA
AATGAAGGATATTTCCGAGCTGCGGATTGTGCGGACGTGGCGCTTCGACCCGGCAGAAGCGGAATTTGAAGTGCATTGA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(205-264)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

71.186

100

0.719

Multiple sequence alignment