Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   BEN74_RS12410 Genome accession   NZ_CP032279
Coordinates   2268560..2270782 (-) Length   740 a.a.
NCBI ID   WP_068909771.1    Uniprot ID   A0A3B7QG31
Organism   Acinetobacter sp. WCHAc010034     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2263560..2275782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEN74_RS12385 (BEN74_12385) - 2263571..2264035 (-) 465 WP_068909779.1 DUF2147 domain-containing protein -
  BEN74_RS19830 - 2264151..2264285 (+) 135 WP_265936567.1 hypothetical protein -
  BEN74_RS12390 (BEN74_12390) - 2264360..2264821 (-) 462 WP_068909776.1 DUF2147 domain-containing protein -
  BEN74_RS12400 (BEN74_12400) - 2265723..2266598 (-) 876 WP_068909948.1 Hsp33 family molecular chaperone HslO -
  BEN74_RS12405 (BEN74_12405) - 2266649..2268490 (-) 1842 WP_068909772.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  BEN74_RS12410 (BEN74_12410) priA 2268560..2270782 (-) 2223 WP_068909771.1 primosomal protein N' Machinery gene
  BEN74_RS12415 (BEN74_12415) gspF 2270933..2272138 (+) 1206 WP_068909768.1 type II secretion system inner membrane protein GspF -
  BEN74_RS12420 (BEN74_12420) gspG 2272178..2272633 (+) 456 WP_068909945.1 type II secretion system major pseudopilin GspG -
  BEN74_RS12425 (BEN74_12425) - 2272918..2273253 (+) 336 WP_068909766.1 hypothetical protein -
  BEN74_RS12430 (BEN74_12430) lnt 2273368..2274927 (-) 1560 WP_068909764.1 apolipoprotein N-acyltransferase -
  BEN74_RS12435 (BEN74_12435) - 2274924..2275763 (-) 840 WP_068909762.1 HlyC/CorC family transporter -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 83095.10 Da        Isoelectric Point: 9.2041

>NTDB_id=314718 BEN74_RS12410 WP_068909771.1 2268560..2270782(-) (priA) [Acinetobacter sp. WCHAc010034]
MQVPAPAPNAIYRVRVAVPVYLHDCFDYRLSAEQYRQAQAGARVAVSFGRQNLVGVIVEKLAPDAPLDPGIKLKAITELL
DGQAILDSKVLSLLTWAAQYYQFPVGEVIQSALPALLRQGKPYNLLARTWKLLDSDAENKLKRSERQQEAYRVLKLHPSG
TSENLLNLAGIETATLKALEKKAICECVLEAQDFSPMPVSMAQMPLTANPDQKKAIEAVLKARKKYQAFLLDGLTGSGKT
EVYLQVMQEVLKQGRQVLVLVPEIGLTPQTVSRFQSRFHCNIALLHSGLTDAKRLQAWQAAQTGKASIILGTRSAVFTPL
PNLGLIVLDEEHDLSFKQQEGFRYHARDIALYRAHLQQCPVVLGSATPSIDSYALVQNGKMSCLELNQRAGAALMPKIHI
LDLKVAQKQHGISQMLLQEMKKRLDKQEQVLVFLNRRGYAPVLICESCAWQAKCPHCDANFTVHRTPYQHLHCHHCGTVH
RMPDRCPQCSHSELKSIGMGTAKVEESLNELFPDYEVIRVDRDSTSRAGSWQKIYDKIQKSGPLILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDFRATERTAQLVVQVAGRAGRGERKGDVYLQTLRPEHPLLNTLVQEDYRQFARQTLKERQAALM
PPFRYAALIRCESKDQALNTDFLQHHAQLLRQNSENTVDIWGPIPAPMERKAGRYQSHMVLLSADRARLHFHIRSWWQGM
LQAKPSSMKLTLDIDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=314718 BEN74_RS12410 WP_068909771.1 2268560..2270782(-) (priA) [Acinetobacter sp. WCHAc010034]
ATGCAAGTTCCAGCCCCTGCCCCAAACGCCATTTACCGGGTCCGCGTTGCCGTTCCGGTCTATCTGCACGACTGCTTTGA
CTACCGCCTGAGCGCCGAACAGTACCGGCAGGCGCAGGCCGGCGCGCGCGTGGCGGTGTCTTTCGGCCGGCAGAATCTGG
TCGGCGTGATTGTGGAAAAGCTGGCGCCCGATGCGCCGCTCGACCCCGGCATCAAGCTGAAAGCCATTACCGAACTGCTG
GACGGGCAGGCCATTTTAGACAGCAAAGTTTTAAGTTTGTTGACATGGGCGGCGCAGTATTACCAGTTTCCGGTCGGCGA
AGTGATTCAAAGCGCGCTGCCGGCGCTGCTGCGCCAAGGCAAGCCTTACAACCTGCTGGCCAGAACATGGAAGCTGCTGG
ACAGCGATGCAGAGAATAAGCTCAAGCGCTCTGAGCGCCAGCAGGAAGCCTATAGGGTGTTAAAGTTGCATCCTTCCGGC
ACCTCAGAAAACCTGCTGAACCTGGCCGGCATTGAAACCGCCACGCTGAAAGCGCTGGAAAAAAAAGCCATCTGCGAATG
CGTTCTGGAAGCGCAGGACTTCAGCCCGATGCCGGTCAGCATGGCGCAGATGCCCTTAACGGCCAATCCGGATCAGAAAA
AAGCCATTGAGGCGGTGCTGAAAGCGCGCAAAAAATATCAGGCCTTTCTGCTGGACGGCCTGACCGGCAGCGGCAAGACT
GAAGTCTATCTGCAGGTCATGCAGGAGGTGCTGAAGCAGGGCAGGCAGGTGCTGGTGCTGGTGCCGGAAATCGGCCTGAC
TCCGCAAACCGTCAGCCGCTTCCAGTCACGCTTCCACTGCAATATCGCCCTGCTGCATTCCGGCCTGACTGACGCCAAGC
GCCTGCAGGCCTGGCAGGCGGCGCAAACCGGCAAAGCCTCGATTATTTTAGGCACGCGCTCCGCAGTCTTTACCCCTTTG
CCTAATTTGGGGCTGATTGTGCTGGATGAGGAGCATGACCTGTCCTTCAAGCAGCAGGAAGGTTTCCGCTACCACGCGCG
GGATATTGCGCTGTACCGCGCGCATCTGCAGCAGTGCCCGGTGGTGCTGGGTTCGGCCACTCCAAGCATTGACAGCTATG
CCCTGGTGCAGAACGGCAAAATGAGCTGCCTGGAGCTGAATCAGCGCGCCGGCGCGGCGCTGATGCCGAAAATCCATATT
CTGGATTTAAAAGTGGCGCAGAAGCAGCACGGCATCAGCCAGATGCTGCTGCAGGAAATGAAAAAGCGCCTGGATAAGCA
AGAGCAGGTGCTGGTGTTTTTAAACCGGCGCGGCTATGCGCCAGTGCTGATCTGCGAAAGCTGCGCATGGCAGGCCAAAT
GCCCGCACTGCGACGCCAATTTTACCGTGCACCGCACGCCCTATCAGCATCTGCACTGCCACCACTGCGGCACGGTGCAC
CGCATGCCGGACCGCTGCCCGCAATGCAGCCACAGCGAACTGAAGTCCATCGGCATGGGCACCGCCAAGGTTGAGGAAAG
CCTGAACGAGCTGTTTCCGGACTATGAAGTGATCCGGGTTGACCGCGATTCGACCAGCCGCGCCGGCAGCTGGCAGAAAA
TTTACGATAAAATTCAGAAAAGCGGGCCGCTGATCCTGCTCGGCACGCAAATGCTGGCCAAGGGGCATCATTTCCCCTAT
GTGACTTTGGTGGCGATTCTGGATATCGATTCCGGCCTGCTGAGCGTGGATTTCCGCGCGACTGAGCGCACCGCGCAGCT
GGTAGTGCAGGTTGCGGGGCGCGCCGGGCGCGGCGAGCGCAAAGGCGATGTCTACCTGCAGACCCTGCGCCCTGAGCATC
CGCTGCTGAATACGCTGGTGCAGGAAGATTACCGCCAGTTTGCCCGGCAGACCCTGAAAGAGCGCCAGGCTGCGCTGATG
CCGCCGTTCCGCTATGCTGCGCTGATCCGCTGCGAATCCAAAGATCAGGCGCTGAATACAGATTTTCTACAGCATCATGC
CCAGCTTTTAAGGCAGAATTCTGAAAACACCGTGGATATTTGGGGGCCGATTCCCGCCCCGATGGAGCGCAAGGCCGGGC
GCTATCAGTCGCATATGGTGCTGCTGTCAGCCGACCGCGCCAGGCTGCATTTCCATATCCGCAGCTGGTGGCAGGGCATG
CTGCAGGCCAAGCCTTCCAGCATGAAATTAACCTTGGACATTGACCCGCAGGAACTCAGCTGA

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(210-371)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(642-736)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3B7QG31

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

69.824

99.865

0.697

Multiple sequence alignment