Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   BEN74_RS09690 Genome accession   NZ_CP032279
Coordinates   1677212..1678777 (+) Length   521 a.a.
NCBI ID   WP_068908052.1    Uniprot ID   A0A3B7PPS0
Organism   Acinetobacter sp. WCHAc010034     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1672212..1683777
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEN74_RS09665 (BEN74_09665) thrC 1672495..1673637 (+) 1143 WP_068908056.1 threonine synthase -
  BEN74_RS09670 (BEN74_09670) - 1673710..1674480 (-) 771 WP_068908054.1 hypothetical protein -
  BEN74_RS09675 (BEN74_09675) - 1674523..1675137 (-) 615 WP_068908112.1 DUF6915 family protein -
  BEN74_RS09680 (BEN74_09680) - 1675290..1676345 (-) 1056 WP_162898167.1 serine hydrolase -
  BEN74_RS09685 (BEN74_09685) - 1676555..1677190 (+) 636 WP_068908108.1 response regulator -
  BEN74_RS09690 (BEN74_09690) pilS 1677212..1678777 (+) 1566 WP_068908052.1 sensor histidine kinase Regulator
  BEN74_RS09695 (BEN74_09695) pilR 1678798..1680210 (+) 1413 WP_068908105.1 sigma-54-dependent transcriptional regulator Regulator
  BEN74_RS09700 (BEN74_09700) - 1680225..1681397 (-) 1173 WP_068908050.1 S41 family peptidase -
  BEN74_RS09705 (BEN74_09705) gpmI 1681419..1682966 (-) 1548 WP_068908048.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence

Protein


Download         Length: 521 a.a.        Molecular weight: 58937.33 Da        Isoelectric Point: 7.1910

>NTDB_id=314709 BEN74_RS09690 WP_068908052.1 1677212..1678777(+) (pilS) [Acinetobacter sp. WCHAc010034]
MNQRASHSELNQYHLGSWYSAYRFIISFCLLLIFLATYTQLAPEYPYPQLYLYVLTAYVVITSLQYLALNKIQAAVPRQL
VLIFFADVSALSLLALALDGPNLHLSLLFVITIFAASLLLDARKALIITLAAVISIVYQLFLGSILDFASLKNIGNSALL
AFLFFVVYGSGQIAVRRFQILENLNFSQSLELNRLQNINRYILEQIETGYLVLDDNCHVVLSNPAACVLLGMPPAYSAEK
YPLYKAQPDLFQLLKFEALQNGEKFQFESQQSRYHIHVHVQKLNVPHQTLTLLVLQDAQRLNQQVQQLKLAALGQLSASI
AHEIRNPLAAIVQANDLSAGSAPEQQQLLSRMISKQAKRIDSIIQDTLNMVKNKETHAVLLRLNDFIPLLLQEDLADIQH
KIQLHMQQGCCIYFDEAQLRQVLINLIRNAVRHNDPEAPHIELNIYPHEQKMRLDVRDFGQGVAVQHQASLFQPFFSTEI
TGTGLGLYLARSFCEANQAQLTYAEQQRGACFRLTCQRAEL

Nucleotide


Download         Length: 1566 bp        

>NTDB_id=314709 BEN74_RS09690 WP_068908052.1 1677212..1678777(+) (pilS) [Acinetobacter sp. WCHAc010034]
ATGAATCAGCGCGCCAGCCATTCAGAATTAAATCAGTATCATCTGGGCAGCTGGTACAGCGCTTACCGCTTCATCATCAG
CTTCTGCCTGCTGCTGATTTTTCTGGCCACCTATACCCAGCTGGCGCCTGAATACCCCTACCCGCAGCTGTATCTGTACG
TGCTGACGGCCTATGTGGTGATCACTAGCCTGCAGTATTTAGCCCTCAATAAAATCCAGGCGGCCGTTCCCAGGCAGCTG
GTGCTGATTTTTTTTGCCGATGTCAGCGCGCTCAGCCTGCTGGCGCTGGCGCTGGACGGCCCGAACCTGCATTTAAGCCT
GCTGTTTGTGATCACGATTTTCGCCGCCTCGCTGCTGCTGGATGCGCGGAAAGCCCTGATCATTACGCTGGCGGCCGTGA
TCAGCATTGTTTACCAGCTGTTTCTGGGTTCAATTTTAGACTTTGCTTCGCTGAAGAATATCGGCAACAGCGCGCTGCTG
GCCTTCCTGTTTTTTGTGGTTTACGGCAGCGGCCAGATTGCGGTGCGGCGCTTCCAGATTCTGGAAAACCTGAACTTTTC
CCAGTCGCTGGAGCTGAACCGGCTGCAGAATATCAACCGCTACATTCTGGAGCAGATTGAGACCGGCTATCTGGTTCTGG
ATGACAACTGCCATGTGGTGCTGAGCAATCCGGCCGCCTGCGTGCTGCTGGGCATGCCGCCGGCCTACAGCGCCGAAAAA
TACCCGCTGTACAAAGCCCAGCCGGACCTGTTTCAGCTGCTGAAATTTGAAGCGCTGCAGAACGGCGAAAAATTCCAGTT
TGAATCACAGCAGAGCCGCTACCATATTCATGTGCATGTGCAGAAGCTGAATGTGCCGCATCAGACCCTGACGCTGCTGG
TGCTGCAGGATGCGCAAAGGCTGAATCAGCAGGTGCAGCAGCTGAAGCTGGCGGCTTTGGGCCAGCTTTCGGCCAGCATT
GCCCATGAAATCCGCAACCCGCTGGCCGCCATTGTGCAGGCCAATGACCTGAGCGCCGGCAGCGCGCCGGAACAGCAGCA
GCTGCTGAGCCGCATGATTTCCAAACAGGCCAAGCGCATTGACAGCATCATTCAGGACACCCTGAATATGGTCAAGAATA
AGGAAACCCATGCCGTGCTGCTGCGCCTGAATGACTTTATTCCGCTGCTGCTGCAGGAAGATCTGGCGGACATTCAGCAT
AAAATCCAGCTGCATATGCAGCAAGGCTGCTGCATTTACTTTGATGAGGCGCAGCTGCGCCAGGTGCTGATCAATTTAAT
CCGCAATGCGGTGCGCCATAATGACCCGGAAGCGCCGCATATTGAACTGAACATCTATCCGCATGAGCAGAAAATGCGGC
TGGATGTGCGCGATTTCGGCCAAGGCGTTGCTGTTCAGCATCAGGCATCGCTATTTCAGCCTTTTTTCAGTACCGAAATT
ACCGGAACTGGTTTAGGATTATACCTTGCGCGCAGCTTCTGTGAAGCCAATCAGGCGCAGCTCACTTATGCAGAACAACA
ACGGGGAGCCTGCTTCCGGCTGACATGCCAGCGCGCAGAGCTTTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(415-517)

His Kinase A (phospho-acceptor) domain (HisKA)

(312-373)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3B7PPS0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

56.867

99.232

0.564

Multiple sequence alignment