Detailed information NTG0314692

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: BEN74_RS03685
• Genome accession: NZ_CP032279
• Coordinates: 484474..485151 (-)
• Length: 225 a.a.
• NCBI ID: WP_068912346.1
• Uniprot ID: A0A3B7PLJ5
• Organism: Acinetobacter sp. WCHAc010034
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 479474..490151

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BEN74_RS03655 (BEN74_03650)	-	479908..480339 (-)	432	WP_068912357.1	SRPBCC family protein	-
BEN74_RS03660 (BEN74_03655)	tadA	480403..480915 (-)	513	WP_068912355.1	tRNA adenosine(34) deaminase TadA	-
BEN74_RS03665 (BEN74_03660)	-	480919..482043 (-)	1125	WP_068912353.1	enoyl-CoA hydratase/isomerase family protein	-
BEN74_RS03670 (BEN74_03665)	ung	482040..482753 (-)	714	WP_068912351.1	uracil-DNA glycosylase	-
BEN74_RS03675 (BEN74_03670)	-	482799..483395 (-)	597	WP_068912349.1	6-pyruvoyl trahydropterin synthase family protein	-
BEN74_RS03680 (BEN74_03675)	gspK	483518..484477 (-)	960	WP_228200388.1	type II secretion system minor pseudopilin GspK	-
BEN74_RS03685 (BEN74_03680)	xcpW	484474..485151 (-)	678	WP_068912346.1	type II secretion system minor pseudopilin GspJ	Machinery gene
BEN74_RS03690 (BEN74_03685)	xcpV	485148..485591 (-)	444	WP_068912344.1	type II secretion system minor pseudopilin GspI	Machinery gene
BEN74_RS03695 (BEN74_03690)	-	485588..486133 (-)	546	WP_068912342.1	pilus assembly FimT family protein	-
BEN74_RS03700 (BEN74_03695)	-	486143..486757 (-)	615	WP_068912339.1	TetR/AcrR family transcriptional regulator	-
BEN74_RS03705 (BEN74_03700)	-	486802..487575 (-)	774	WP_068912337.1	TatD family hydrolase	-
BEN74_RS03710 (BEN74_03705)	-	487606..487947 (-)	342	WP_068912334.1	PilZ domain-containing protein	-
BEN74_RS03715 (BEN74_03710)	-	487964..488947 (-)	984	WP_068912331.1	DNA polymerase III subunit delta'	-
BEN74_RS03720 (BEN74_03715)	kdsB	488960..489721 (-)	762	WP_068912329.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 225 a.a.
• Molecular weight: 25251.52 Da
• Isoelectric Point: 5.8604

>NTDB_id=314692 BEN74_RS03685 WP_068912346.1 484474..485151(-) (xcpW) [Acinetobacter sp. WCHAc010034]
MSRRQGFTLVELLVAIAIFAVLSALGWKVFDYISKVKERNSMHEVRLSQLQEAYQQILRDTLQAVPLTANINGDIQPAMV
LQNGRFNFSKTGVTDPLNQGIAPDERVEYQYNAADKKLYRLKYRNINQSGHDQPDSSVLLADVEQFEIRVLNPEELSAWP
DPSADLSKRSGLQRLPRGLKIKLSVNEVEYEWLFSLLNTDFLQQDGNSGGKGGGNPKDGKQEVSG

Nucleotide

• Length: 678 bp

>NTDB_id=314692 BEN74_RS03685 WP_068912346.1 484474..485151(-) (xcpW) [Acinetobacter sp. WCHAc010034]
ATGAGCAGGCGCCAAGGCTTTACGCTGGTTGAGCTGCTGGTCGCCATTGCGATTTTTGCTGTGCTGTCGGCGCTGGGCTG
GAAAGTTTTTGACTATATTTCAAAGGTCAAAGAGCGCAACAGCATGCATGAAGTCCGGCTTTCGCAGCTGCAGGAAGCCT
ATCAGCAGATTTTGCGTGATACCCTGCAGGCGGTGCCGCTGACGGCCAATATCAATGGCGACATTCAGCCCGCGATGGTG
CTGCAGAATGGGCGCTTCAACTTCAGCAAAACCGGCGTAACCGATCCGCTCAATCAGGGCATCGCGCCGGATGAGCGGGT
GGAATACCAATATAATGCTGCGGATAAAAAGCTTTACCGGCTGAAATACCGCAATATTAATCAGTCAGGGCATGATCAGC
CGGATTCCAGCGTGCTGCTGGCCGATGTTGAGCAGTTTGAAATCCGCGTGCTGAATCCTGAAGAATTAAGCGCCTGGCCT
GACCCTTCAGCGGACCTGAGCAAGCGCAGCGGGCTGCAGCGCTTGCCGCGCGGCTTGAAAATTAAGCTGAGCGTAAATGA
AGTCGAATATGAATGGCTGTTCAGCCTGCTGAATACCGACTTCCTGCAGCAGGACGGCAATTCGGGTGGAAAAGGCGGCG
GCAATCCAAAAGACGGCAAGCAGGAGGTGTCTGGATGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-25)

• Type II secretion system (T2SS), protein J (T2SSJ) (59-193)

3D structure

• AlphaFold DB: A0A3B7PLJ5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	57.895	92.889	0.538