Detailed information NTG0314149

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: D3N19_RS02025
• Genome accession: NZ_CP032154
• Coordinates: 396881..398029 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain ZF2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 391881..403029

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D3N19_RS02005 (D3N19_02005)	-	392284..392967 (-)	684	WP_032872874.1	ABC transporter ATP-binding protein	-
D3N19_RS02010 (D3N19_02010)	-	392982..394412 (-)	1431	WP_032872876.1	ABC transporter permease	-
D3N19_RS02015 (D3N19_02015)	-	394625..395308 (+)	684	WP_032872879.1	response regulator transcription factor	-
D3N19_RS02020 (D3N19_02020)	-	395295..396728 (+)	1434	WP_161503657.1	HAMP domain-containing sensor histidine kinase	-
D3N19_RS02025 (D3N19_02025)	rapC	396881..398029 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
D3N19_RS02030 (D3N19_02030)	phrC	398013..398132 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
D3N19_RS02035 (D3N19_02035)	-	398283..398378 (-)	96	WP_021495118.1	YjcZ family sporulation protein	-
D3N19_RS02040 (D3N19_02040)	-	398473..399837 (-)	1365	WP_007609394.1	aspartate kinase	-
D3N19_RS02045 (D3N19_02045)	ceuB	400251..401204 (+)	954	WP_032872883.1	ABC transporter permease	Machinery gene
D3N19_RS02050 (D3N19_02050)	-	401194..402141 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
D3N19_RS02055 (D3N19_02055)	-	402135..402893 (+)	759	WP_007609404.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=314149 D3N19_RS02025 WP_007410270.1 396881..398029(+) (rapC) [Bacillus velezensis strain ZF2]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=314149 D3N19_RS02025 WP_007410270.1 396881..398029(+) (rapC) [Bacillus velezensis strain ZF2]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTACCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAGGGGCTTCTCGATTATTACGTCAATTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGACACATATAACGTCCGGATTATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568