Detailed information NTG0314109

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: LL1196_RS12335
• Genome accession: NZ_CP032148
• Coordinates: 2361406..2362437 (-)
• Length: 343 a.a.
• NCBI ID: WP_021216375.1
• Uniprot ID: -
• Organism: Lactococcus cremoris strain 1196
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 2356406..2367437

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LL1196_RS12305 (LL1196_2459)	-	2358309..2358806 (-)	498	WP_011677211.1	nitroreductase family protein	-
LL1196_RS12310 (LL1196_2460)	-	2358829..2359008 (-)	180	WP_050574404.1	hypothetical protein	-
LL1196_RS12315 (LL1196_2461)	-	2359005..2359229 (-)	225	WP_014573364.1	hypothetical protein	-
LL1196_RS12320 (LL1196_2462)	-	2359296..2360186 (+)	891	WP_014572485.1	IS982-like element IS982B family transposase	-
LL1196_RS12325 (LL1196_2463)	-	2360187..2360906 (-)	720	WP_021216373.1	radical SAM protein	-
LL1196_RS12330 (LL1196_03810)	-	2360974..2361087 (-)	114	WP_021216374.1	KxxxW-cyclized peptide pheromone	-
LL1196_RS12335 (LL1196_2464)	sepM	2361406..2362437 (-)	1032	WP_021216375.1	SepM family pheromone-processing serine protease	Regulator
LL1196_RS12340 (LL1196_2465)	coaD	2362421..2362921 (-)	501	WP_011677214.1	pantetheine-phosphate adenylyltransferase	-
LL1196_RS12345 (LL1196_2466)	rsmD	2362969..2363508 (-)	540	WP_031286167.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LL1196_RS12350 (LL1196_2467)	-	2363679..2364899 (-)	1221	WP_011677216.1	MFS transporter	-
LL1196_RS12355 (LL1196_2468)	lmrP	2364983..2366209 (-)	1227	Protein_2401	multidrug efflux MFS transporter LmrP	-
LL1196_RS12360 (LL1196_2470)	-	2366397..2366891 (+)	495	WP_021211251.1	RNA polymerase sigma factor	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 37428.05 Da
• Isoelectric Point: 9.8499

>NTDB_id=314109 LL1196_RS12335 WP_021216375.1 2361406..2362437(-) (sepM) [Lactococcus cremoris strain 1196]
MKKKNKKISPKLKWGISIGLIIVALLVLVYPTNYYVEMPGTTEPLGKMVKVEGKKDEHKGDFFLTTVQIARANLATMIYS
HFNSFTSIYSEQEMTGGLNDAQFNRVNQFYMETAQNTAVYQAFKLANKPYELKYEGVYVLDIAKNSTFKNKLELSDTITA
VNGEEFKSSADMIAYVSKQKVGDSVTIEYTRIDGSKHKSTGKYIKIANGKTGIGIGLVDHTEVVTDPKVTVNAGSIGGPS
AGIMFTLEIYSQLTGKDLRGSREIAGTGTIEHDGSIGQIGGVDKKVATASKEGAKVFLVPDSGTKKESSNNYLGAKAAAK
KLKTKMKIVPVKTIQDALDYLEK

Nucleotide

• Length: 1032 bp

>NTDB_id=314109 LL1196_RS12335 WP_021216375.1 2361406..2362437(-) (sepM) [Lactococcus cremoris strain 1196]
ATGAAGAAAAAAAATAAAAAAATCAGTCCCAAATTAAAATGGGGCATCTCTATTGGTCTGATTATTGTCGCTCTCCTTGT
TTTAGTGTATCCAACAAATTACTATGTGGAAATGCCTGGAACAACCGAGCCATTAGGAAAAATGGTCAAAGTCGAAGGAA
AAAAAGATGAGCACAAAGGTGACTTTTTCCTTACTACCGTTCAAATTGCGCGCGCTAATCTTGCCACAATGATTTACAGT
CATTTTAATAGTTTTACAAGCATTTACAGTGAACAAGAAATGACCGGTGGCCTTAATGATGCGCAGTTCAATCGTGTCAA
CCAGTTTTACATGGAAACGGCACAAAATACAGCCGTTTATCAGGCCTTCAAGTTGGCAAATAAACCCTATGAACTGAAAT
ATGAAGGGGTTTATGTCCTTGATATCGCTAAAAATTCGACTTTTAAAAATAAATTGGAACTTTCGGACACGATTACAGCA
GTCAATGGGGAAGAATTTAAATCAAGTGCAGATATGATTGCTTACGTTTCGAAGCAAAAAGTCGGCGATTCAGTTACCAT
TGAATATACACGGATTGATGGAAGTAAACACAAGTCTACTGGAAAATATATCAAAATCGCTAATGGAAAAACTGGAATCG
GAATTGGACTAGTTGACCATACTGAAGTAGTCACAGACCCAAAAGTTACAGTCAATGCAGGTTCAATCGGTGGACCATCT
GCCGGAATAATGTTTACACTAGAGATTTACAGTCAGTTGACAGGTAAAGATTTACGTGGTAGTCGCGAAATAGCAGGAAC
TGGAACGATTGAACATGATGGAAGCATTGGCCAAATCGGTGGGGTTGATAAAAAAGTAGCTACTGCTAGCAAAGAAGGCG
CAAAAGTTTTCTTAGTTCCTGACTCAGGCACCAAAAAAGAAAGCAGCAATAACTATCTTGGAGCCAAAGCAGCCGCTAAA
AAATTAAAAACGAAGATGAAAATTGTTCCCGTCAAGACTATTCAGGACGCTTTAGATTATTTAGAAAAATAA

Domains

Predicted by InterproScan.

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (229-339)

• PDZ domain (PDZ_2) (135-193)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	48.406	100	0.487