Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   D3C60_RS20095 Genome accession   NZ_CP032144
Coordinates   349175..349339 (+) Length   54 a.a.
NCBI ID   WP_269195014.1    Uniprot ID   -
Organism   Bacillus velezensis strain BIM B-439D     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 344175..354339
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D3C60_RS20090 srfAB 346120..349110 (+) 2991 Protein_314 surfactin non-ribosomal peptide synthetase SrfAB -
  D3C60_RS20095 comS 349175..349339 (+) 165 WP_269195014.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6238.22 Da        Isoelectric Point: 11.7559

>NTDB_id=313963 D3C60_RS20095 WP_269195014.1 349175..349339(+) (comS) [Bacillus velezensis strain BIM B-439D]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=313963 D3C60_RS20095 WP_269195014.1 349175..349339(+) (comS) [Bacillus velezensis strain BIM B-439D]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5

Multiple sequence alignment