Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   CDG60_RS13620 Genome accession   NZ_CP032134
Coordinates   2667546..2672174 (-) Length   1542 a.a.
NCBI ID   WP_087513335.1    Uniprot ID   A0A3B7LZN5
Organism   Acinetobacter chinensis strain WCHAc010005     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2662546..2677174
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CDG60_RS13590 (CDG60_13590) elsL 2663616..2664119 (-) 504 WP_087513340.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  CDG60_RS13595 (CDG60_13595) - 2664129..2664503 (-) 375 WP_087513339.1 YbaN family protein -
  CDG60_RS13600 (CDG60_13600) - 2664593..2665501 (+) 909 WP_087513338.1 DUF1853 family protein -
  CDG60_RS13605 (CDG60_13605) - 2665591..2665734 (+) 144 WP_171405459.1 entericidin A/B family lipoprotein -
  CDG60_RS13610 (CDG60_13610) dapE 2665852..2666985 (+) 1134 WP_087513337.1 succinyl-diaminopimelate desuccinylase -
  CDG60_RS13615 (CDG60_13615) - 2667088..2667549 (-) 462 WP_087513336.1 hypothetical protein -
  CDG60_RS13620 (CDG60_13620) chpA 2667546..2672174 (-) 4629 WP_087513335.1 Hpt domain-containing protein Regulator
  CDG60_RS13625 (CDG60_13625) - 2672326..2674398 (-) 2073 WP_087513334.1 methyl-accepting chemotaxis protein -
  CDG60_RS13630 (CDG60_13630) - 2674440..2674976 (-) 537 WP_087513333.1 chemotaxis protein CheW -
  CDG60_RS13635 (CDG60_13635) - 2674980..2675348 (-) 369 WP_087513332.1 PleD family two-component system response regulator -
  CDG60_RS13640 (CDG60_13640) pilG 2675386..2675772 (-) 387 WP_087513331.1 twitching motility response regulator PilG Regulator
  CDG60_RS13645 (CDG60_13645) - 2676135..2676689 (+) 555 WP_087513360.1 hypothetical protein -

Sequence

Protein


Download         Length: 1542 a.a.        Molecular weight: 171765.68 Da        Isoelectric Point: 4.2010

>NTDB_id=313828 CDG60_RS13620 WP_087513335.1 2667546..2672174(-) (chpA) [Acinetobacter chinensis strain WCHAc010005]
MKEILKNLVENTTLPEDSYLDQDAEILEIFVEELEEIFTELDEQFPAWFENASDTETLITIRRHFHTLKGSGRMVGAKSA
GELAWTVEDILNRVMGGSLVLNLPIQKFALTVYKIFQFRLYPDFKNVQEAAIDLRPLVLLGQQLQQNLSPEPALEDLLQL
SETLSAENTLTGLEFADDESVTAQVVVATAADEAETVHEELTEVSEEIPAVQDDSFVQETMSIFLEEAEEHLATIEAFLA
EEQSSKQDYNGLIRALHTLRGSSSMAQIEHIFDASSNVENLFKNLLQDEIVSTSRETALLVQYAEFVGDYLLTLRNGADQ
SRLNTIYQTFNDVWDNYGFSVQTGEHEANPQGLVSRLIELNIDLLLDAEFEFDKRAKVEFPEYIQELSEQAGHLINNTDN
RASEGIHQFTLELKSAYDGLVEKPALLTLDYAYELFAKAHQEFIYLFDTLAAGQRVSLTDDMQKLLNELAAFVQQDIEQF
ESEPAAQPDLSTESAEAEDISVAVQEPQPVQAASVESAGLDLAKLSRQLQAAKSQSGAADTNTDFDPDLLDIFLEEAEEL
LAGMDQDLNTWTAEQSNTAALNNLMRYLHTLKGGANMVQATHIGLISHEIETIYERIINQQITVTPGLIGIIRLVQDDIA
DRIQTIRDEQVDYSSAQAVDILKNISELSKGGIASTSEVTEPKVESASEHIDDALAFAVSDQDELPELDDVISVASDIIA
VEPSLSEPELTEPLTAETLIEQPAAEYAEPAQSQKHADLESVRSIVEETFLEEAEELLDSSDLLLAQWFEQRSDRSILLQ
LQRAAHSLKGGARMAEIEPVASIAYELETIFEQFAVHQFNSNAYDPLLQTTLAWLRQAIFEHDYTNFDSLKSNLESIEYV
NVTAQLPDRLTHKDILAPSRTFEFVQGDGTEPPAMMGEWGDTSSRDDSNEMIRISADLVEKMIDLSGENSINRSRIEMDL
GQLGNTLNEMELAIKRLADQLRRMDGELESQILAKHGTDNSRYEDFDPLEMDQYSSLNQLSKSLAESASDLVDFKSTIAE
KIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRLLPRLQRIVRQTSSTLNRPAELLVQNTEGELDRTILERLVTPFEHML
RNAIDHGIEEDTAQRLEAGKPEVGKIELNITRQGTDVVVTFSDDGKGIDDTRILEKALSQGLIKPDQKVSKEETLQLIFH
PGLSTAKAVTQISGRGVGLDVVQSEIKALGGLVTVDSEIGKGTTFTIRVPTTVAVSDALMVKAGDQQFAIPLAQIERIVR
IAPSTLETYFDGNDDYFKIDNESYKLRYISEFVANQPLPRLHSIAHSLPVLLIKGSTGQSIALLVDQLVGSRGQIVVKPI
GQQFSGIAAIAGATILGDGQVCLIIDGQSIARQILATQRTKHASEHRESSRHSNARRLVMIVDDSVTVRKVTSRLLERQG
YDVVTAKDGVDAMEQLENVKPDLMLLDIEMPRMDGFEVTNLVRHHDIHQKLPIIMITSRTGEKHRERAFSLGVTHYMGKP
FQEAELLTNIENLLAAEYEVNG

Nucleotide


Download         Length: 4629 bp        

>NTDB_id=313828 CDG60_RS13620 WP_087513335.1 2667546..2672174(-) (chpA) [Acinetobacter chinensis strain WCHAc010005]
ATGAAAGAAATATTAAAAAATTTAGTTGAAAATACAACTCTTCCCGAAGATAGCTATCTTGATCAGGATGCAGAAATTCT
TGAAATTTTTGTCGAAGAACTGGAAGAAATCTTCACTGAACTGGATGAGCAGTTTCCGGCATGGTTTGAAAATGCCTCAG
ATACTGAAACATTGATCACTATCCGTCGCCACTTTCATACCTTGAAAGGTTCTGGGCGTATGGTTGGGGCTAAATCTGCC
GGTGAACTGGCATGGACAGTAGAAGATATACTGAACCGTGTCATGGGGGGATCACTGGTTCTGAATCTTCCGATTCAGAA
ATTTGCTTTAACGGTTTATAAAATTTTTCAGTTCAGACTTTATCCTGATTTTAAAAATGTTCAGGAAGCTGCAATTGATT
TAAGACCATTGGTGTTGTTAGGACAGCAGCTTCAGCAGAATCTCAGTCCTGAACCTGCACTTGAAGATTTACTTCAGTTG
TCTGAAACGCTGTCTGCTGAGAATACGCTGACAGGTCTTGAGTTTGCAGATGATGAGTCGGTTACTGCACAAGTGGTTGT
TGCCACGGCAGCTGATGAAGCTGAAACTGTTCATGAAGAGCTCACTGAAGTATCTGAAGAAATCCCTGCTGTTCAGGATG
ACAGCTTTGTTCAGGAAACAATGTCTATTTTCCTTGAAGAAGCAGAAGAGCATCTGGCAACGATTGAAGCTTTTCTTGCA
GAAGAGCAGTCATCAAAACAGGACTATAACGGGCTGATCCGTGCTCTGCATACGCTTCGCGGCAGTTCGTCCATGGCACA
GATTGAGCATATTTTTGATGCCAGTTCCAATGTGGAAAACCTGTTTAAAAACCTGTTGCAGGATGAAATTGTATCCACTT
CAAGAGAAACAGCATTACTGGTTCAGTATGCTGAGTTTGTAGGTGATTATCTGCTTACGCTTCGAAATGGAGCTGACCAG
TCAAGACTGAATACGATTTATCAGACATTTAACGATGTGTGGGATAACTACGGTTTCAGTGTTCAGACTGGAGAACATGA
AGCAAATCCTCAAGGTCTGGTTTCCAGGCTGATTGAGCTGAATATTGATCTGTTGCTTGATGCTGAGTTTGAGTTTGATA
AACGTGCCAAAGTTGAATTCCCTGAATATATTCAGGAGTTAAGCGAGCAGGCAGGACATCTGATTAATAATACAGATAAC
CGTGCATCTGAAGGTATTCATCAGTTTACACTGGAGCTGAAGTCTGCTTACGATGGTCTGGTTGAAAAGCCGGCACTTCT
GACTCTTGACTATGCCTATGAGTTGTTTGCAAAGGCACATCAGGAATTTATTTATCTGTTTGATACACTGGCAGCAGGAC
AGCGTGTCAGCCTGACAGATGATATGCAGAAACTGTTGAATGAGCTGGCAGCATTTGTACAGCAGGATATTGAACAGTTT
GAATCCGAGCCAGCTGCTCAGCCAGATCTGAGTACTGAATCTGCTGAAGCTGAAGATATTTCAGTTGCAGTTCAGGAACC
ACAACCAGTACAGGCTGCATCTGTCGAGTCGGCGGGTCTGGATCTTGCAAAACTGTCCCGACAGTTACAGGCAGCTAAGT
CTCAGTCTGGTGCAGCTGACACAAATACTGATTTTGACCCTGATCTGCTTGATATTTTCCTTGAAGAAGCAGAAGAACTG
CTTGCCGGAATGGATCAGGATCTGAATACATGGACAGCAGAACAGTCCAATACTGCTGCACTGAATAATCTGATGCGTTA
TCTGCATACACTGAAAGGTGGTGCAAATATGGTTCAGGCCACGCACATAGGTCTGATTTCACATGAAATAGAAACGATTT
ACGAACGGATTATCAACCAGCAGATTACGGTTACTCCTGGATTGATCGGTATTATCCGGCTTGTTCAGGATGATATCGCC
GACCGTATTCAGACGATTCGTGATGAGCAGGTTGATTATTCTTCCGCTCAGGCAGTGGATATACTGAAAAATATTTCAGA
ACTGTCAAAAGGTGGTATTGCATCCACTTCTGAAGTTACAGAGCCGAAAGTTGAATCTGCTTCTGAGCATATTGATGATG
CACTGGCGTTTGCAGTATCCGATCAGGATGAGCTGCCAGAACTGGATGATGTCATCAGTGTTGCGTCAGATATTATTGCG
GTTGAGCCTTCCTTATCTGAACCTGAGCTGACTGAGCCTCTCACTGCTGAAACATTGATTGAACAACCTGCTGCAGAGTA
CGCTGAACCTGCACAAAGTCAGAAACATGCTGATCTTGAAAGTGTGCGTTCAATTGTGGAAGAAACCTTCCTTGAAGAAG
CAGAAGAACTGCTGGATTCTTCGGATCTGTTACTTGCTCAATGGTTTGAACAGCGTTCAGACCGTAGTATTCTGCTTCAG
TTACAGCGTGCCGCGCACAGCTTGAAGGGCGGTGCCCGTATGGCTGAAATTGAGCCGGTCGCGTCTATTGCTTATGAGCT
GGAAACGATCTTTGAGCAGTTTGCTGTACACCAGTTCAACTCAAATGCTTATGATCCGTTGCTTCAGACGACACTGGCAT
GGTTACGTCAGGCGATATTTGAGCATGATTACACCAATTTCGACAGCCTCAAGTCCAATCTTGAGTCCATTGAATATGTC
AACGTAACGGCTCAGTTACCAGACAGGCTGACTCACAAAGATATTCTTGCACCGTCCAGAACCTTTGAGTTTGTTCAGGG
TGATGGTACTGAACCACCTGCAATGATGGGTGAGTGGGGCGATACTTCGAGCCGTGATGACAGTAATGAAATGATCCGTA
TCTCAGCCGACCTGGTTGAGAAGATGATTGACCTGTCAGGTGAAAACTCAATTAACCGTTCACGTATTGAGATGGATCTG
GGGCAGTTGGGTAATACGCTGAATGAAATGGAGCTTGCGATTAAGCGACTGGCGGATCAGCTGCGTCGAATGGATGGTGA
GCTTGAATCACAGATCCTGGCAAAACACGGTACTGACAACTCACGCTATGAAGATTTCGATCCACTTGAGATGGATCAGT
ATTCATCTTTAAATCAGTTATCCAAATCACTTGCGGAGTCTGCATCGGATCTGGTGGACTTTAAGAGCACGATTGCGGAA
AAAATCCGTGATGCAGAAGGTCTGTTATTACAGCAGTCCCGTATTCAGGCAGAAATTCAGGAAAGTCTGATGCGGACACG
CCTGGTTCCGTTCTCAAGACTGTTGCCCCGTTTACAACGTATTGTGCGTCAGACCTCATCGACATTGAACCGTCCTGCGG
AACTGCTGGTACAGAATACAGAGGGCGAACTGGACCGTACTATTCTTGAACGCCTGGTGACTCCATTTGAGCATATGCTT
CGAAATGCGATTGACCATGGTATTGAAGAGGATACTGCACAGCGTCTTGAAGCCGGTAAACCCGAAGTCGGTAAAATTGA
ACTCAATATTACCCGTCAGGGAACCGATGTTGTAGTTACATTCAGTGATGACGGTAAGGGTATTGATGATACCCGTATTC
TTGAAAAAGCACTGAGCCAGGGGCTGATTAAACCTGATCAGAAAGTCAGTAAAGAAGAAACTTTACAGCTGATTTTCCAC
CCTGGTTTAAGTACTGCGAAAGCAGTGACACAGATTTCGGGTCGTGGAGTCGGACTTGATGTCGTGCAAAGCGAAATTAA
AGCCTTAGGTGGTCTGGTAACTGTTGATTCTGAGATTGGTAAAGGAACAACCTTTACCATCCGTGTACCGACAACGGTTG
CGGTCAGTGATGCGCTGATGGTGAAAGCCGGTGATCAGCAGTTTGCTATTCCACTGGCTCAGATTGAACGTATTGTGCGG
ATTGCACCATCTACGCTTGAAACTTATTTTGATGGCAATGACGATTATTTCAAAATTGACAACGAATCCTATAAGTTACG
CTATATTTCAGAATTTGTTGCAAATCAGCCATTACCGCGACTGCACAGTATCGCGCATTCATTACCGGTACTGCTGATTA
AAGGCAGTACGGGGCAGAGTATTGCATTACTGGTCGATCAGCTGGTTGGTTCACGTGGTCAGATTGTTGTAAAACCGATT
GGACAACAGTTCTCCGGTATTGCCGCGATTGCAGGTGCAACGATCCTTGGTGATGGTCAGGTCTGTCTGATTATTGATGG
TCAAAGTATTGCACGTCAGATTCTGGCGACACAGCGTACGAAACATGCGTCTGAACACCGTGAGTCATCACGACACAGCA
ATGCACGTCGTCTGGTGATGATTGTGGATGACTCCGTAACAGTACGTAAGGTAACTTCACGTCTGCTTGAACGTCAGGGT
TATGATGTTGTGACAGCCAAAGATGGTGTGGATGCGATGGAGCAGCTGGAAAATGTCAAACCGGATCTGATGCTGCTTGA
TATTGAAATGCCGCGGATGGATGGTTTTGAAGTGACCAACCTGGTAAGACACCATGACATTCATCAGAAACTGCCAATTA
TCATGATTACATCGCGTACAGGTGAGAAACACCGTGAGCGTGCATTCAGTCTGGGTGTGACTCATTATATGGGTAAACCG
TTCCAGGAAGCAGAATTGCTGACCAATATTGAAAATCTGTTGGCGGCTGAATATGAGGTGAATGGATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1419-1530)

CheW-like domain (CheW)

(1258-1393)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1115-1251)

Hpt domain (Hpt)

(548-634)

Hpt domain (Hpt)

(768-832)

Hpt domain (Hpt)

(25-94)

Hpt domain (Hpt)

(220-287)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

59.459

100

0.599

Multiple sequence alignment